Evidence map›Paper›PMID 25395329›Full record

ArticleEuropean biophysics journal : EBJ2014

Copper-zinc cross-modulation in prion protein binding.

Francesco Stellato, Velia Minicozzi, Glenn L Millhauser, Marco Pascucci, Olivier Proux, Giancarlo C Rossi, Ann Spevacek, Silvia Morante

Open access · greenAbstract read
In one paragraph

Article in European biophysics journal : EBJ, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.7field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 19 citations in OpenAlex.

  1. Review
  2. Cu(Proline)Molecules (Basel, Switzerland) · 2022
    Article
  3. Aggregates Sealed by Ions.Methods in molecular biology (Clifton, N.J.) · 2022
    Article
  4. Molecular Features of the ZnBiophysical journal · 2019
    Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 3 countries.

Francesco StellatoDepartment of Physics and INFN, University of Rome Tor Vergata, Via della Ricerca Scientifica, 00133, Rome, Italy.
Velia Minicozzi
Glenn L Millhauser
Marco Pascucci
Olivier Proux
Giancarlo C Rossi
Ann Spevacek
Silvia Morante
University of Rome Tor Vergata · ITUniversity of California, Santa Cruz · USEnrico Fermi Center for Study and Research · ITObservatoire des Sciences de l'Univers de Grenoble

Funding

Molecular Aspects of Copper Binding to the Prion ProteinR01GM065790 · NIGMS · UNIVERSITY OF CALIFORNIA SANTA CRUZ · PI MILLHAUSER, GLENN L · 2002 to 2018
$4.5M
NIGMS NIH HHS R01 GM065790
6 · The paper itself

Abstract

In this paper we report a systematic XAS study of a set of samples in which Cu(II) was progressively added to complexes in which Zn(II) was bound to the tetra-octarepeat portion of the prion protein. This work extends previous EPR and XAS analysis in which, in contrast, the effect of adding Zn(II) to Cu(II)-tetra-octarepeat complexes was investigated. Detailed structural analysis of the XAS spectra taken at both the Cu and Zn K-edge when the two metals are present at different relative concentrations revealed that Zn(II) and Cu(II) ions compete for binding to the tetra-octarepeat peptide by cross-regulating their relative binding modes. We show that the specific metal-peptide coordination mode depends not only, as expected, on the relative metal concentrations, but also on whether Zn(II) or Cu(II) was first bound to the peptide. In particular, it seems that the Zn(II) binding mode in the absence of Cu(II) is able to promote the formation of small peptide clusters in which triplets of tetra-octarepeats are bridged by pairs of Zn ions. When Cu(II) is added, it starts competing with Zn(II) for binding, disrupting the existing peptide cluster arrangement, despite the fact that Cu(II) is unable to completely displace Zn(II). These results may have a bearing on our understanding of peptide-aggregation processes and, with the delicate cross-regulation balancing we have revealed, seem to suggest the existence of an interesting, finely tuned interplay among metal ions affecting protein binding, capable of providing a mechanism for regulation of metal concentration in cells.

Indexed as

Amino Acid SequenceCopperDose-Response Relationship, DrugMolecular Sequence DataPeptide FragmentsPrionsProtein BindingZincCopperPeptide FragmentsPrionsZinc

Identifiers

PMID25395329
PMCPMC4839480
OpenAlexW2097362149

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.