Evidence map›Paper›PMID 25395096›Full record

ArticleEnvironmental health : a global access science source2014

Short-term airborne particulate matter exposure alters the epigenetic landscape of human genes associated with the mitogen-activated protein kinase network: a cross-sectional study.

Juan Jose Carmona, Tamar Sofer, John Hutchinson, Laura Cantone, Brent Coull, Arnab Maity, Pantel Vokonas, Xihong Lin, Joel Schwartz, Andrea A Baccarelli

Open access · goldAbstract read
In one paragraph

Article in Environmental health : a global access science source, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed, 2 pooled it
4.4field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 2 syntheses or guidelines pooled it, 64 citations in OpenAlex.

  1. Pooled it
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  3. Review
  4. Exposure to PMEnvironmental geochemistry and health · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Juan Jose Carmona
Tamar Sofer
John Hutchinson
Laura Cantone
Brent Coull
Arnab Maity
Pantel Vokonas
Xihong Lin
Joel Schwartz
Andrea A BaccarelliLaboratory of Human Environmental Epigenetics, Department of Environmental Health, Harvard School of Public Health, Boston, MA, USA. abaccare@hsph.harvard.edu.
Quantitative BioSciences · USNorth Carolina State University · USUniversity of Milan · ITVA Boston Healthcare System · US

Funding

Translational Research Support CoreP30ES000002 · NIEHS · HARVARD UNIVERSITY (SCH OF PUBLIC HLTH) · PI SUSAN A KORRICK · 1985 to 2026
$44.6M
Training Program in Environmental EpidemiologyT32ES007069 · NIEHS · HARVARD UNIVERSITY (SCH OF PUBLIC HLTH) · PI LADEN, FRANCINE · 1985 to 2024
$13.9M
Statistical Methods for Analysis of Massive Genetic and Genomic Data in Cancer ResearchR35CA197449 · NCI · HARVARD UNIVERSITY D/B/A HARVARD SCHOOL OF PUBLIC HEALTH · PI XIHONG LIN · 2015 to 2026
$10.9M
Statistical Methods for the Spatio-Temporal Assessment of Social Disparities in CancerP01CA134294 · NCI · HARVARD SCHOOL OF PUBLIC HEALTH · PI DOMINICI, FRANCESCA, LIN, XIHONG · 2008 to 2017
$6.8M
Epigenetic Effects of Particles and Metals on Cardiac Health of an Aging CohortR01ES015172 · NIEHS · HARVARD SCHOOL OF PUBLIC HEALTH · PI SCHWARTZ, JOEL D · 2006 to 2015
$4.8M
Statistical Methods for Correlated and High-Dimensional Biomedical DataR37CA076404 · NCI · HARVARD SCHOOL OF PUBLIC HEALTH · PI LIN, XIHONG · 2007 to 2014
$2.5M
Molecular and Epigenetic Mitochondriomics of Air Particles, Lead and CognitionR01ES021733 · NIEHS · HARVARD SCHOOL OF PUBLIC HEALTH · PI BACCARELLI, ANDREA · 2012 to 2015
$2.4M
Mitochondriomic Biomarkers of Air Pollution Exposure and Respiratory Function DecF32ES024068 · NIEHS · HARVARD SCHOOL OF PUBLIC HEALTH · PI CARMONA, JUAN JOSE · 2014 to 2014
$60k
NCI NIH HHS P01 CA134294NCI NIH HHS P01-CA134294NCI NIH HHS R35 CA197449NCI NIH HHS R-37-CA076404NCI NIH HHS R37 CA076404NIEHS NIH HHS 1F32ES024068-01NIEHS NIH HHS F32 ES024068NIEHS NIH HHS P30 ES000002NIEHS NIH HHS P30ES00002NIEHS NIH HHS R00ES01774NIEHS NIH HHS R01 ES015172NIEHS NIH HHS R01ES015172NIEHS NIH HHS R01 ES021733NIEHS NIH HHS R01ES021733NIEHS NIH HHS T32 ES007069NIEHS NIH HHS T32 ES7069
6 · The paper itself

Abstract

backgroundExposure to air particulate matter is known to elevate blood biomarkers of inflammation and to increase cardiopulmonary morbidity and mortality. Major components of airborne particulate matter typically include black carbon from traffic and sulfates from coal-burning power plants. DNA methylation is thought to be sensitive to these environmental toxins and possibly mediate environmental effects on clinical outcomes via regulation of gene networks. The underlying mechanisms may include epigenetic modulation of major inflammatory pathways, yet the details remain unclear.

methodsWe sought to elucidate how short-term exposure to air pollution components, singly and/or in combination, alter blood DNA methylation in certain inflammation-associated gene networks, MAPK and NF-κB, which may transmit the environmental signal(s) and influence the inflammatory pathway in vivo. To this end, we utilized a custom-integrated workflow-molecular processing, pollution surveillance, biostatical analysis, and bioinformatic visualization-to map novel human (epi)gene pathway-environment interactions.

resultsSpecifically, out of 84 MAPK pathway genes considered, we identified 11 whose DNA methylation status was highly associated with black carbon exposure, after adjusting for potential confounders-age, sulfate exposure, smoking, blood cell composition, and blood pressure. Moreover, after adjusting for these confounders, multi-pollutant analysis of synergistic DNA methylations significantly associated with sulfate and BC exposures yielded 14 MAPK genes. No associations were found with the NF-κB pathway.

conclusionExposure to short-term air pollution components thus resulted in quantifiable epigenetic changes in the promoter areas of MAPK pathway genes. Bioinformatic mapping of single- vs. multi-exposure-associated epigenetic changes suggests that these alterations might affect biological pathways in nuanced ways that are not simply additive or fully predictable via individual-level exposure assessments.

Indexed as

DNA MethylationAgedAged, 80 and overAir PollutantsCarbonEnvironmental MonitoringEpigenesis, GeneticGene-Environment InteractionHumansMaleMiddle AgedMitogen-Activated Protein KinasesNF-kappa BParticulate MatterPromoter Regions, GeneticSulfatesAir PollutantsCarbonMitogen-Activated Protein KinasesNF-kappa BParticulate MatterSulfates

Identifiers

PMID25395096
PMCPMC4273424
OpenAlexW2126333961

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.