Evidence map›Paper›PMID 25394418›Full record

ArticleParasites & vectors2014

Identification of six New World Leishmania species through the implementation of a High-Resolution Melting (HRM) genotyping assay.

Carolina Hernández, Catalina Alvarez, Camila González, Martha Stella Ayala, Cielo Maritza León, Juan David Ramírez

Open access · goldAbstract readEvaluation Study
In one paragraph

Article in Parasites & vectors, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
3.5field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 99 citations in OpenAlex.

  1. Article
  2. Molecular diagnosis of trypanosomatids inInternational journal for parasitology. Parasites and wildlife · 2025
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  3. Emergence of autochthonousFrontiers in veterinary science · 2025
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  4. Assessment of High-Resolution Melting Curve Analysis forPathogens (Basel, Switzerland) · 2024
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  5. Article
  6. Novel duplex TaqMan-based quantitative PCR for rapid and accurate diagnosis ofCurrent research in parasitology & vector-borne diseases · 2024
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  7. Article
  8. HRM Accuracy and Limitations as a Species Typing Tool forInternational journal of molecular sciences · 2023
    Article
  9. Detection ofAnimals : an open access journal from MDPI · 2023
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  10. Evaluation of the Diagnostic Sensitivity of the VIASURETransboundary and emerging diseases · 2023
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  11. Accurate Identification ofJournal of arthropod-borne diseases · 2022
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  16. Identification ofJournal of parasitic diseases : official organ of the Indian Society for Parasitology · 2021
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  17. Article
  18. Article
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Carolina HernándezGrupo de Parasitología, Instituto Nacional de Salud, Bogotá, Colombia. dcahernandezc@gmail.com.
Catalina AlvarezCentro de Investigaciones en Microbiología y Parasitología Tropical (CIMPAT), Departamento de Ciencias Biológicas, Facultad de Ciencias, Universidad de los Andes, Bogotá, Colombia. mc.alvarez68@uniandes.edu.co.
Camila GonzálezCentro de Investigaciones en Microbiología y Parasitología Tropical (CIMPAT), Departamento de Ciencias Biológicas, Facultad de Ciencias, Universidad de los Andes, Bogotá, Colombia. c.gonzalez2592@uniandes.edu.co.
Martha Stella AyalaGrupo de Parasitología, Instituto Nacional de Salud, Bogotá, Colombia. mayala@ins.gov.co.
Cielo Maritza LeónGrupo de Investigaciones Microbiológicas - UR (GIMUR), Facultad de Ciencias Naturales y Matemáticas, Universidad del Rosario, Bogotá, Colombia. cmlr8527@gmail.com.
Juan David RamírezGrupo de Investigaciones Microbiológicas - UR (GIMUR), Facultad de Ciencias Naturales y Matemáticas, Universidad del Rosario, Bogotá, Colombia. juand.ramirez@urosario.edu.co.
Instituto Nacional de Salud · COUniversidad de Los Andes · COUniversidad del Rosario · CO

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundLeishmaniases are tropical zoonotic diseases, caused by parasites from the genus Leishmania. New World (NW) species are related to sylvatic cycles although urbanization processes have been reported in some South American Countries such as Colombia. This eco-epidemiological complexity imposes a challenge to the detection of circulating parasite species, not only related to human cases but also infecting vectors and reservoirs. Currently, no harmonized methods have been deployed to discriminate the NW Leishmania species.

findingsHerein, we conducted a systematic and mechanistic High-Resolution Melting (HRM) assay targeted to HSP70 and ITS1. Specific primers were designed that coupled with a HRM analyses permitted to discriminate six NW Leishmania species. In order to validate the herein described algorithm, we included 35 natural isolates obtained from human cases, insect vectors and mammals. Our genotyping assay allowed the correct assignment of the six NW Leishmania species (L. mexicana, L. infantum (chagasi), L. amazonensis, L. panamensis, L. guyanensis and L. braziliensis) based on reference strains. When the algorithm was applied to a set of well-characterized strains by means of PCR-RFLP, MLEE and monoclonal antibodies (MA) we observed a tailored concordance between the HRM and PCR-RFLP/MLEE/MA (KI = 1.0). Additionally, we tested the limit of detection for the HRM method showing that this is able to detect at least 10 equivalent-parasites per mL.

conclusionsThis is a rapid and reliable method to conduct molecular epidemiology and host-parasite association studies in endemic areas.

Indexed as

Genetic TechniquesAnimalsDNA, ProtozoanGenotypeHumansInsect VectorsLeishmaniaLeishmaniasisMammalsTransition TemperatureDNA, Protozoan

Identifiers

PMID25394418
PMCPMC4239372
OpenAlexW2119058421

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.