Evidence map›Paper›PMID 25391913›Full record

ArticleBioTechniques2014

Marking cells with infrared fluorescent proteins to preserve photoresponsiveness in the retina.

Bozena Fyk-Kolodziej, Chase B Hellmer, Tomomi Ichinose

Open access · goldAbstract read
In one paragraph

Article in BioTechniques, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.7field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Bozena Fyk-KolodziejDepartment of Anatomy and Cell Biology, Wayne State University School of Medicine, Detroit, MI.
Chase B HellmerDepartment of Anatomy and Cell Biology, Wayne State University School of Medicine, Detroit, MI.
Tomomi IchinoseDepartment of Anatomy and Cell Biology, Wayne State University School of Medicine, Detroit, MI; Department of Ophthalmology, Wayne State University School of Medicine, Detroit, MI.
Wayne State University · US

Funding

MECHANISMS OF TEMPORAL ENCODING IN RETINAL BIPOLAR CELLSR01EY020533 · NEI · WAYNE STATE UNIVERSITY · PI ICHINOSE, TOMOMI · 2011 to 2015
$1.8M
NEI NIH HHS NIH R01EY020533NEI NIH HHS R01 EY020533
6 · The paper itself

Abstract

Green fluorescent protein (GFP) and its derivatives are broadly used in biomedical experiments for labeling particular cells or molecules. In the mouse retina, the light (~500 nm) used to excite GFP can also lead to photoreceptor bleaching (peak ~500 nm), which diminishes photoreceptor-mediated synaptic transmission in the retinal network. To overcome this problem, we investigated the use of infrared fluorescent protein (iRFP) as a marker since it is excited by light in the near-infrared range that would not damage the photoresponsiveness of the retina. Initially, we tested iRFP expression in human embryonic kidney 293 (HEK293) cells to confirm that conventional fluorescence microscopy can detect iRFP fluorescence. We next introduced the iRFP plasmid into adeno-associated virus 2 (AAV-2) and injected the resulting AAV-2 solution into the intraocular space. Retinal neurons were found to successfully express iRFP three weeks post-injection. Light-evoked responses in iRFP-marked cells were assessed using patch clamping, and light sensitivity was found to be similar in iRFP-expressing cells and non-iRFP-expressing cells, an indication that iRFP expression and detection do not affect retinal light responsiveness. Taken together, our results suggest iRFP can be a new tool for vision research, allowing for single-cell recordings from an iRFP marked neuron using conventional fluorescence microscopy.

Indexed as

AnimalsBacterial ProteinsExcitatory Postsynaptic PotentialsGreen Fluorescent ProteinsHEK293 CellsHumansLuminescent ProteinsMiceMice, Inbred C57BLMice, TransgenicMicroscopy, FluorescencePhotic StimulationPhotochemical ProcessesRetinaBacterial ProteinsGreen Fluorescent ProteinsLuminescent Proteinsyellow fluorescent protein, BacteriaAAViRFPlight responseretina

Identifiers

PMID25391913
PMCPMC4477279
OpenAlexW2466191090

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.