Evidence map›Paper›PMID 25391809›Full record

ArticleNature communications2014

Rapid detection of single bacteria in unprocessed blood using Integrated Comprehensive Droplet Digital Detection.

Dong-Ku Kang, M Monsur Ali, Kaixiang Zhang, Susan S Huang, Ellena Peterson, Michelle A Digman, Enrico Gratton, Weian Zhao

Abstract read
In one paragraph

Article in Nature communications, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 98 papers.

0numbers the graph read from it
0cells of the map it votes in
98citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

98 citing papers in PubMed.

  1. Article
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  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Review
  12. Article
  13. A DNAzymes-in-droplets assay forChemical science · 2024
    Article
  14. Review
  15. Article
  16. Review
  17. Infection-specific PET imaging withFrontiers in microbiology · 2023
    Article
  18. Paper-based sensors for bacteria detection.Nature reviews bioengineering · 2023
    Review
  19. Article
  20. Article

38 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Dong-Ku Kang1] Department of Pharmaceutical Sciences, University of California-Irvine, 845 Health Sciences Road, Irvine, California 92697, USA [2] Sue and Bill Gross Stem Cell Research Center, University of California-Irvine, 845 Health Sciences Road, Irvine, California 92697, USA [3] Chao Family Comprehensive Cancer Center, University of California-Irvine, 845 Health Sciences Road, Irvine, California 92697, USA [4] Edwards Lifesciences Center for Advanced Cardiovascular Technology, University of California-Irvine, 845 Health Sciences Road, Irvine, California 92697, USA [5] Department of Biomedical Engineering, University of California-Irvine, 845 Health Sciences Road, Irvine, California 92697, USA.
M Monsur Ali1] Department of Pharmaceutical Sciences, University of California-Irvine, 845 Health Sciences Road, Irvine, California 92697, USA [2] Sue and Bill Gross Stem Cell Research Center, University of California-Irvine, 845 Health Sciences Road, Irvine, California 92697, USA [3] Chao Family Comprehensive Cancer Center, University of California-Irvine, 845 Health Sciences Road, Irvine, California 92697, USA [4] Edwards Lifesciences Center for Advanced Cardiovascular Technology, University of California-Irvine, 845 Health Sciences Road, Irvine, California 92697, USA [5] Department of Biomedical Engineering, University of California-Irvine, 845 Health Sciences Road, Irvine, California 92697, USA.
Kaixiang Zhang1] Department of Pharmaceutical Sciences, University of California-Irvine, 845 Health Sciences Road, Irvine, California 92697, USA [2] Sue and Bill Gross Stem Cell Research Center, University of California-Irvine, 845 Health Sciences Road, Irvine, California 92697, USA [3] Chao Family Comprehensive Cancer Center, University of California-Irvine, 845 Health Sciences Road, Irvine, California 92697, USA [4] Edwards Lifesciences Center for Advanced Cardiovascular Technology, University of California-Irvine, 845 Health Sciences Road, Irvine, California 92697, USA [5] Department of Biomedical Engineering, University of California-Irvine, 845 Health Sciences Road, Irvine, California 92697, USA [6] Department of Chemistry, Beijing Key Laboratory for Analytical Methods and Instrumentation, Tsinghua University, Beijing 100084, China.
Susan S HuangDivision of Infectious Diseases and Health Policy Research Institute, School of Medicine, University of California-Irvine, Irvine, California 92697, USA.
Ellena PetersonDepartment of Pathology and Laboratory Medicine, University of California, Irvine, California 92697, USA.
Michelle A Digman1] Department of Biomedical Engineering, University of California-Irvine, 845 Health Sciences Road, Irvine, California 92697, USA [2] Laboratory for Fluorescence Dynamics, University of California, Irvine, California 92697, USA [3] Centre for Bioactive Discovery in Health and Ageing, School of Science and Technology, University of New England, Armidale, New South Wales 2351, Australia.
Enrico Gratton1] Department of Biomedical Engineering, University of California-Irvine, 845 Health Sciences Road, Irvine, California 92697, USA [2] Laboratory for Fluorescence Dynamics, University of California, Irvine, California 92697, USA.
Weian Zhao1] Department of Pharmaceutical Sciences, University of California-Irvine, 845 Health Sciences Road, Irvine, California 92697, USA [2] Sue and Bill Gross Stem Cell Research Center, University of California-Irvine, 845 Health Sciences Road, Irvine, California 92697, USA [3] Chao Family Comprehensive Cancer Center, University of California-Irvine, 845 Health Sciences Road, Irvine, California 92697, USA [4] Edwards Lifesciences Center for Advanced Cardiovascular Technology, University of California-Irvine, 845 Health Sciences Road, Irvine, California 92697, USA [5] Department of Biomedical Engineering, University of California-Irvine, 845 Health Sciences Road, Irvine, California 92697, USA.

Funding

Uncover Strategies Used By Biological SystemsP50GM076516 · NIGMS · UNIVERSITY OF CALIFORNIA-IRVINE · PI LANDER, ARTHUR D · 2007 to 2016
$25.1M
TRD4: Phasor analysisP41GM103540 · NIGMS · UNIVERSITY OF CALIFORNIA-IRVINE · PI GRATTON, ENRICO · 2012 to 2020
$12.5M
Institute for Clinical and Translational ScienceUL1TR000153 · NCATS · UNIVERSITY OF CALIFORNIA-IRVINE · PI COOPER, DAN M · 2012 to 2015
$12.1M
NCATS NIH HHS UL1 TR000153NIGMS NIH HHS NIH P50-GM076516NIGMS NIH HHS P41 GM103540NIGMS NIH HHS P50 GM076516
6 · The paper itself

Abstract

Blood stream infection or sepsis is a major health problem worldwide, with extremely high mortality, which is partly due to the inability to rapidly detect and identify bacteria in the early stages of infection. Here we present a new technology termed 'Integrated Comprehensive Droplet Digital Detection' (IC 3D) that can selectively detect bacteria directly from milliliters of diluted blood at single-cell sensitivity in a one-step, culture- and amplification-free process within 1.5-4 h. The IC 3D integrates real-time, DNAzyme-based sensors, droplet microencapsulation and a high-throughput 3D particle counter system. Using Escherichia coli as a target, we demonstrate that the IC 3D can provide absolute quantification of both stock and clinical isolates of E. coli in spiked blood within a broad range of extremely low concentration from 1 to 10,000 bacteria per ml with exceptional robustness and limit of detection in the single digit regime.

Indexed as

BloodDNA, BacterialDNA, CatalyticDrug CompoundingEscherichia coliHumansLimit of DetectionMicrofluidic Analytical TechniquesSensitivity and SpecificitySepsisDNA, BacterialDNA, Catalytic

Identifiers

PMID25391809
PMCPMC4243214

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.