Evidence map›Paper›PMID 25391383›Full record

ArticleJournal of Alzheimer's disease : JAD2015

Genetic variation in imprinted genes is associated with risk of late-onset Alzheimer's disease.

Mamoonah Chaudhry, Xingbin Wang, Mikhil N Bamne, Shahida Hasnain, F Yesim Demirci, Oscar L Lopez, M Ilyas Kamboh

Abstract read
In one paragraph

Article in Journal of Alzheimer's disease : JAD, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed.

  1. Review
  2. Article
  3. Long-Term Effects of ART on the Health of the Offspring.International journal of molecular sciences · 2023
    Review
  4. Article
  5. DNA Methylation NearPediatric diabetes · 2023
    Article
  6. Review
  7. Article
  8. Article
  9. Review
  10. Polycomb repressive 2 complex-Molecular mechanisms of function.Protein science : a publication of the Protein Society · 2019
    Review
  11. Review
  12. Review
  13. Article
  14. Review
  15. Review
  16. Article
  17. Review
  18. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Mamoonah ChaudhryDepartment of Microbiology and Molecular Genetics, University of the Punjab, Lahore, Pakistan.
Xingbin WangDepartment of Human Genetics, University of Pittsburgh, Pittsburgh, PA, USA.
Mikhil N BamneDepartment of Human Genetics, University of Pittsburgh, Pittsburgh, PA, USA.
Shahida HasnainDepartment of Microbiology and Molecular Genetics, University of the Punjab, Lahore, Pakistan The Women University Multan, Multan, Pakistan.
F Yesim DemirciDepartment of Human Genetics, University of Pittsburgh, Pittsburgh, PA, USA.
Oscar L LopezDepartment of Neurology, University of Pittsburgh, Pittsburgh, PA, USA Alzheimer's Disease Research Center, University of Pittsburgh, Pittsburgh, PA, USA.
M Ilyas KambohDepartment of Human Genetics, University of Pittsburgh, Pittsburgh, PA, USA Alzheimer's Disease Research Center, University of Pittsburgh, Pittsburgh, PA, USA.

Funding

TREATMENT OF DEPRESSION IN ALZHEIMER'S DISEASEP50AG005133 · NIA · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI BECKER, JAMES T. · 1985 to 2019
$43.0M
Mild Cognitive Impairment: A Prospective Community StudyR01AG023651 · NIA · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI GANGULI, MARY · 2005 to 2020
$27.1M
Mild Cognitive Impairment: A Prospective Community StudyR37AG023651 · NIA · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI Carmen Andreescu, MARY GANGULI · 2021 to 2026
$18.2M
Search for the Alzheimers GenesR01AG030653 · NIA · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI KAMBOH, M. ILYAS · 2009 to 2019
$7.7M
Deep Resequencing of Candidate Gene Regions in Late-onset Alzheimer's DiseaseR01AG041718 · NIA · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI KAMBOH, M. ILYAS · 2012 to 2016
$3.0M
EPIDEMIOLOGY OF DEMENTIA: A PROSPECTIVE COMMUNITY STUDYR01AG007562 · NIA · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI GANGULI, MARY · 1989 to 2002
$2.0M
NIA NIH HHS AG005133NIA NIH HHS AG023651NIA NIH HHS AG030653NIA NIH HHS AG041718NIA NIH HHS AG07562NIA NIH HHS P50 AG005133NIA NIH HHS R01 AG007562NIA NIH HHS R01 AG023651NIA NIH HHS R01 AG030653NIA NIH HHS R01 AG041718NIA NIH HHS R37 AG023651
6 · The paper itself

Abstract

Epigenetic changes including genomic imprinting may affect risk of late-onset Alzheimer's disease (LOAD). There are >100 known imprinted genes and most of them are expressed in human brain. In this study, we examined the association of single nucleotide polymorphisms (SNPs) in 93 imprinted genes with LOAD risk in 1291 LOAD cases and 958 cognitively normal controls. We performed single-site, gene-based, and haplotype analyses. Single-site analysis showed 14 significant associations at p < 0.01. The most significant SNP (rs11770199; p = 0.0003) in single-site analysis was located on chromosome 7 in the GRB10 gene. Gene-based analyses revealed four significant associations in the WT1, ZC3H12C, DLGAP2, and GPR1 genes at p < 0.05. The haplotype analysis also revealed significant associations with three genes (ZC3H12C, DLGAP2, and GPR1). These findings suggest a possible role of imprinted genes in AD pathogenesis that show specific expression in the brain.

Indexed as

AgedAged, 80 and overAlzheimer DiseaseFemaleGenetic Association StudiesGenetic Predisposition to DiseaseGenomic ImprintingGRB10 Adaptor ProteinHaplotypesHumansMaleNerve Tissue ProteinsPolymorphism, Single NucleotideReceptors, G-Protein-CoupledRibonucleasesTranscription FactorsDLGAP2 protein, humanGPR1 protein, humanGRB10 Adaptor ProteinGRB10 protein, humanNerve Tissue ProteinsReceptors, G-Protein-CoupledRibonucleasesTranscription FactorsWT1 protein, humanWT1 ProteinsZC3H12A protein, humanBraingene expressionimprintinglate onset Alzheimer's disease

Identifiers

PMID25391383
PMCPMC4324355

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.