Evidence map›Paper›PMID 25389272›Full record

ArticleNucleic acids research2014

Double-stranded DNA-dependent ATPase Irc3p is directly involved in mitochondrial genome maintenance.

Tiina Sedman, Ilja Gaidutšik, Karin Villemson, YingJian Hou, Juhan Sedman

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.6field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 14 citations in OpenAlex.

  1. Review
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  3. Molecular and cellular biology · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Tiina SedmanInstitute of Molecular and Cell Biology, University of Tartu, Riia 23b, Tartu 51010, Estonia.
Ilja GaidutšikInstitute of Molecular and Cell Biology, University of Tartu, Riia 23b, Tartu 51010, Estonia.
Karin VillemsonInstitute of Molecular and Cell Biology, University of Tartu, Riia 23b, Tartu 51010, Estonia.
YingJian HouInstitute of Molecular and Cell Biology, University of Tartu, Riia 23b, Tartu 51010, Estonia.
Juhan SedmanInstitute of Molecular and Cell Biology, University of Tartu, Riia 23b, Tartu 51010, Estonia juhan.sedman@ut.ee.
University of Tartu · EE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Nucleic acid-dependent ATPases are involved in nearly all aspects of DNA and RNA metabolism. Previous studies have described a number of mitochondrial helicases. However, double-stranded DNA-dependent ATPases, including translocases or enzymes remodeling DNA-protein complexes, have not been identified in mitochondria of the yeast Saccharomyces cerevisae. Here, we demonstrate that Irc3p is a mitochondrial double-stranded DNA-dependent ATPase of the Superfamily II. In contrast to the other mitochondrial Superfamily II enzymes Mss116p, Suv3p and Mrh4p, which are RNA helicases, Irc3p has a direct role in mitochondrial DNA (mtDNA) maintenance. Specific Irc3p-dependent mtDNA metabolic intermediates can be detected, including high levels of double-stranded DNA breaks that accumulate in irc3Δ mutants. irc3Δ-related topology changes in rho- mtDNA can be reversed by the deletion of mitochondrial RNA polymerase RPO41, suggesting that Irc3p counterbalances adverse effects of transcription on mitochondrial genome stability.

Indexed as

Genome, MitochondrialAdenosine TriphosphatasesDNA Breaks, Double-StrandedDNA-Directed RNA PolymerasesDNA HelicasesDNA, MitochondrialEpistasis, GeneticMitochondriaMitochondrial ProteinsMutationSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsAdenosine TriphosphatasesDNA-Directed RNA PolymerasesDNA HelicasesDNA, MitochondrialIrc3 protein, S cerevisiaeMitochondrial ProteinsRPO41 protein, S cerevisiaeSaccharomyces cerevisiae Proteins

Identifiers

PMID25389272
PMCPMC4245962
OpenAlexW1977412277

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.