Evidence map›Paper›PMID 25387073›Full record

ArticleInternational journal of molecular sciences2014

An uncleaved signal peptide directs the Malus xiaojinensis iron transporter protein Mx IRT1 into the ER for the PM secretory pathway.

Peng Zhang, Song Tan, James O Berry, Peng Li, Na Ren, Shuang Li, Guang Yang, Wei-Bing Wang, Xiao-Ting Qi, Li-Ping Yin

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
2.8field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Prediction of Signal Peptides in Proteins from Malaria Parasites.International journal of molecular sciences · 2018
    Article
  7. Genome Wide Identification of OrthologousFrontiers in plant science · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Peng ZhangCollege of Life Science, Capital Normal University, Beijing 100048, China. zhangpeng_cnu@163.com.
Song TanCollege of Life Science, Capital Normal University, Beijing 100048, China. tansong_1515@163.com.
James O BerryDepartment of Biological Sciences, State University of New York, Buffalo, NY 14260, USA. camjob@buffalo.edu.
Peng LiSchool of Life Sciences, Tsinghua University, Beijing 100083, China. lipeng@tsinghua.edu.cn.
Na RenCollege of Life Science, Capital Normal University, Beijing 100048, China. N.Naren@massey.ac.nz.
Shuang LiCollege of Life Science, Capital Normal University, Beijing 100048, China. lishuanghebei@163.com.
Guang YangCollege of Life Science, Capital Normal University, Beijing 100048, China. ygemouse@163.com.
Wei-Bing WangCollege of Life Science, Capital Normal University, Beijing 100048, China. wangweibing14@mails.ucas.ac.cn.
Xiao-Ting QiCollege of Life Science, Capital Normal University, Beijing 100048, China. qixiaoting@cnu.edu.cn.
Li-Ping YinCollege of Life Science, Capital Normal University, Beijing 100048, China. yinlp@cnu.edu.cn.
Capital Normal University · CNTsinghua University · CNUniversity at Buffalo, State University of New York · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Malus xiaojinensis iron-regulated transporter 1 (Mx IRT1) is a highly effective inducible iron transporter in the iron efficient plant Malus xiaojinensis. As a multi-pass integral plasma membrane (PM) protein, Mx IRT1 is predicted to consist of eight transmembrane domains, with a putative N-terminal signal peptide (SP) of 1-29 amino acids. To explore the role of the putative SP, constructs expressing Mx IRT1 (with an intact SP) and Mx DsIRT1 (with a deleted SP) were prepared for expression in Arabidopsis and in yeast. Mx IRT1 could rescue the iron-deficiency phenotype of an Arabidopsis irt1 mutant, and complement the iron-limited growth defect of the yeast mutant DEY 1453 (fet3fet4). Furthermore, fluorescence analysis indicated that a chimeric Mx IRT1-eGFP (enhanced Green Fluorescent Protein) construct was translocated into the ER (Endoplasmic reticulum) for the PM sorting pathway. In contrast, the SP-deleted Mx DsIRT1 could not rescue either of the mutant phenotypes, nor direct transport of the GFP signal into the ER. Interestingly, immunoblot analysis indicated that the SP was not cleaved from the mature protein following transport into the ER. Taken together, data presented here provides strong evidence that an uncleaved SP determines ER-targeting of Mx IRT1 during the initial sorting stage, thereby enabling the subsequent transport and integration of this protein into the PM for its crucial role in iron uptake.

Indexed as

Protein Sorting SignalsSecretory PathwayAmino Acid SequenceCarrier ProteinsEndoplasmic ReticulumGene DeletionGene ExpressionIronMalusMolecular Sequence DataPlant ProteinsCarrier ProteinsIronPlant ProteinsProtein Sorting Signals

Identifiers

PMID25387073
PMCPMC4264175
OpenAlexW2033489550

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.