Evidence map›Paper›PMID 25386184›Full record

ArticleFrontiers in plant science2014

Newly identified helper bacteria stimulate ectomycorrhizal formation in Populus.

Jessy L Labbé, David J Weston, Nora Dunkirk, Dale A Pelletier, Gerald A Tuskan

Open access · goldAbstract read
In one paragraph

Article in Frontiers in plant science, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
9.3field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 88 citations in OpenAlex.

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  10. Fungal-Bacterial Networks in the Habitat of SongRong (Journal of fungi (Basel, Switzerland) · 2022
    Article
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  13. Colonization by the Mycorrhizal HelperFrontiers in microbiology · 2022
    Article
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  19. Dissection of plant microbiota and plant-microbiome interactions.Journal of microbiology (Seoul, Korea) · 2021
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Jessy L LabbéBiosciences Division, Oak Ridge National Laboratory Oak Ridge, TN, USA.
David J WestonBiosciences Division, Oak Ridge National Laboratory Oak Ridge, TN, USA.
Nora DunkirkBiosciences Division, Oak Ridge National Laboratory Oak Ridge, TN, USA.
Dale A PelletierBiosciences Division, Oak Ridge National Laboratory Oak Ridge, TN, USA.
Gerald A TuskanBiosciences Division, Oak Ridge National Laboratory Oak Ridge, TN, USA.
Oak Ridge National Laboratory · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mycorrhiza helper bacteria (MHB) are known to increase host root colonization by mycorrhizal fungi but the molecular mechanisms and potential tripartite interactions are poorly understood. Through an effort to study Populus microbiome, we isolated 21 Pseudomonas strains from native Populus deltoides roots. These bacterial isolates were characterized and screened for MHB effectiveness on the Populus-Laccaria system. Two additional Pseudomonas strains (i.e., Pf-5 and BBc6R8) from existing collections were included for comparative purposes. We analyzed the effect of co-cultivation of these 23 individual Pseudomonas strains on Laccaria bicolor "S238N" growth rate, mycelial architecture and transcriptional changes. Nineteen of the 23 Pseudomonas strains tested had positive effects on L. bicolor S238N growth, as well as on mycelial architecture, with strains GM41 and GM18 having the most significant effect. Four of seven L. bicolor reporter genes, Tra1, Tectonin2, Gcn5, and Cipc1, thought to be regulated during the interaction with MHB strain BBc6R8, were induced or repressed, while interacting with Pseudomonas strains GM17, GM33, GM41, GM48, Pf-5, and BBc6R8. Strain GM41 promoted the highest roots colonization across three Populus species but most notably in P. deltoides, which is otherwise poorly colonized by L. bicolor. Here we report novel MHB strains isolated from native Populus that improve L. bicolor root colonization on Populus. This tripartite relationship could be exploited for Populus species/genotypes nursery production as a means of improving establishment and survival in marginal lands.

Indexed as

fungal-bacterial-Populus interactionsLaccaria bicolormutualistic interactionsmycorrhiza helper bacteriamycorrhizal fungiPopulus rhizospheresoil microbiology

Identifiers

PMID25386184
PMCPMC4208408
OpenAlexW2032455678

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.