Evidence map›Paper›PMID 25383668›Full record

ArticleNature structural & molecular biology2014

Internal motions prime cIAP1 for rapid activation.

Aaron H Phillips, Allyn J Schoeffler, Tsutomu Matsui, Thomas M Weiss, John W Blankenship, Kerry Zobel, Anthony M Giannetti, Erin C Dueber, Wayne J Fairbrother

Abstract read
PubMed Publisher
In one paragraph

Article in Nature structural & molecular biology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 19 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Protein Dynamics revealed by NMR Relaxation Methods.Emerging topics in life sciences · 2020
    Article
  5. Article
  6. Review
  7. Article
  8. A dynamic look backward and forward.Journal of magnetic resonance (San Diego, Calif. : 1997) · 2016
    Review
  9. Article
  10. Genomic insights into head and neck cancer.Cancers of the head & neck · 2016
    Article
  11. Review
  12. Review
  13. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Aaron H PhillipsDepartment of Early Discovery Biochemistry, Genentech, South San Francisco, California, USA.
Allyn J SchoefflerDepartment of Early Discovery Biochemistry, Genentech, South San Francisco, California, USA.
Tsutomu MatsuiStanford Synchrotron Radiation Lightsource, Stanford Linear Accelerator Center National Laboratory, Menlo Park, California, USA.
Thomas M WeissStanford Synchrotron Radiation Lightsource, Stanford Linear Accelerator Center National Laboratory, Menlo Park, California, USA.
John W BlankenshipDepartment of Early Discovery Biochemistry, Genentech, South San Francisco, California, USA.
Kerry ZobelDepartment of Early Discovery Biochemistry, Genentech, South San Francisco, California, USA.
Anthony M GiannettiDepartment of Biochemical and Cellular Pharmacology, Genentech, South San Francisco, California, USA.
Erin C DueberDepartment of Early Discovery Biochemistry, Genentech, South San Francisco, California, USA.
Wayne J FairbrotherDepartment of Early Discovery Biochemistry, Genentech, South San Francisco, California, USA.
SLAC National Accelerator Laboratory · USStanford Synchrotron Radiation Lightsource · US

Funding

X-ray Absorption Spectroscopy (XAS) pp.711-759P41GM103393 · NIGMS · STANFORD UNIVERSITY · PI HODGSON, KEITH O · 2012 to 2019
$30.6M
Proposal for Central California 900 MHZ NMR SpectrometerP41GM068933 · NIGMS · UNIVERSITY OF CALIFORNIA BERKELEY · PI WEMMER, DAVID E · 2003 to 2007
$5.9M
NIGMS NIH HHS GM68933NIGMS NIH HHS P41GM103393
6 · The paper itself

Abstract

Cellular inhibitor of apoptosis 1 (cIAP1) is a ubiquitin ligase with critical roles in the control of programmed cell death and NF-κB signaling. Under normal conditions, the protein exists as an autoinhibited monomer, but proapoptotic signals lead to its dimerization, activation and proteasomal degradation. This view of cIAP1 as a binary switch has been informed by static structural studies that cannot access the protein's dynamics. Here, we use NMR spectroscopy to study micro- and millisecond motions of specific domain interfaces in human cIAP1 and use time-resolved small-angle X-ray scattering to observe the global conformational changes necessary for activation. Although motions within each interface of the 'closed' monomer are insufficient to activate cIAP1, they enable associations with catalytic partners and activation factors. We propose that these internal motions facilitate rapid peptide-induced opening and dimerization of cIAP1, which undergoes a dramatic spring-loaded structural transition.

Indexed as

HumansInhibitor of Apoptosis ProteinsKineticsModels, MolecularNuclear Magnetic Resonance, BiomolecularProtein BindingProtein ConformationProtein MultimerizationProtein Structure, TertiaryScattering, Small AngleUbiquitinUbiquitin-Activating EnzymesUbiquitin-Protein LigasesX-Ray DiffractionBIRC2 protein, humanInhibitor of Apoptosis ProteinsUbiquitinUbiquitin-Activating EnzymesUbiquitin-Protein Ligases

Identifiers

PMID25383668
OpenAlexW2050779013

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.