Evidence map›Paper›PMID 25383373›Full record

ArticleTheScientificWorldJournal2014

Isolation of salt stress-related genes from Aspergillus glaucus CCHA by random overexpression in Escherichia coli.

Jie Fang, Xiaojiao Han, Lihua Xie, Mingying Liu, Guirong Qiao, Jing Jiang, Renying Zhuo

Open access · goldAbstract read
In one paragraph

Article in TheScientificWorldJournal, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.6field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 10 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Jie FangState Key Laboratory of Tree Genetics and Breeding, Chinese Academy of Forestry, Beijing 100091, China ; Key Lab of Tree Genomics, The Research Institute of Subtropical of Forestry, Chinese Academy of Forestry, Fuyang, Zhejiang 311400, China.
Xiaojiao HanState Key Laboratory of Tree Genetics and Breeding, Chinese Academy of Forestry, Beijing 100091, China ; Key Lab of Tree Genomics, The Research Institute of Subtropical of Forestry, Chinese Academy of Forestry, Fuyang, Zhejiang 311400, China.
Lihua XieState Key Laboratory of Tree Genetics and Breeding, Chinese Academy of Forestry, Beijing 100091, China ; Key Lab of Tree Genomics, The Research Institute of Subtropical of Forestry, Chinese Academy of Forestry, Fuyang, Zhejiang 311400, China.
Mingying LiuState Key Laboratory of Tree Genetics and Breeding, Chinese Academy of Forestry, Beijing 100091, China ; Key Lab of Tree Genomics, The Research Institute of Subtropical of Forestry, Chinese Academy of Forestry, Fuyang, Zhejiang 311400, China.
Guirong QiaoState Key Laboratory of Tree Genetics and Breeding, Chinese Academy of Forestry, Beijing 100091, China ; Key Lab of Tree Genomics, The Research Institute of Subtropical of Forestry, Chinese Academy of Forestry, Fuyang, Zhejiang 311400, China.
Jing JiangState Key Laboratory of Tree Genetics and Breeding, Chinese Academy of Forestry, Beijing 100091, China ; Key Lab of Tree Genomics, The Research Institute of Subtropical of Forestry, Chinese Academy of Forestry, Fuyang, Zhejiang 311400, China.
Renying ZhuoState Key Laboratory of Tree Genetics and Breeding, Chinese Academy of Forestry, Beijing 100091, China ; Key Lab of Tree Genomics, The Research Institute of Subtropical of Forestry, Chinese Academy of Forestry, Fuyang, Zhejiang 311400, China.
Chinese Academy of Forestry · CNResearch Institute of Forestry · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The halotolerant fungus Aspergillus glaucus CCHA was isolated from the surface of wild vegetation around a saltern with the salinity range being 0-31%. Here, a full-length cDNA library of A. glaucus under salt stress was constructed to identify genes related to salt tolerance, and one hundred clones were randomly selected for sequencing and bioinformatics analysis. Among these, 82 putative sequences were functionally annotated as being involved in signal transduction, osmolyte synthesis and transport, or regulation of transcription. Subsequently, the cDNA library was transformed into E. coli cells to screen for putative salt stress-related clones. Five putative positive clones were obtained from E. coli cells grown on LB agar containing 1 M NaCl, on which they showed rapid growth compared to the empty vector control line. Analysis of transgenic Arabidopsis thaliana lines overexpressing CCHA-2142 demonstrated that the gene conferred increased salt tolerance to plants as well by protecting the cellular membranes, suppressing the inhibition of chlorophyll biosynthesis. These results highlight the utility of this A. glaucus cDNA library as a tool for isolating and characterizing genes related to salt tolerance. Furthermore, the identified genes can be used for the study of the underlying biology of halotolerance.

Indexed as

SalinityArabidopsisAspergillusCarbohydratesCaseinsEscherichia coliGene Expression Regulation, FungalGene LibraryLipidsPlant Proteins, DietaryPlants, Genetically ModifiedSalt ToleranceSignal TransductionSodium ChlorideStress, PhysiologicalCarbohydratesCaseinsLipidsOsmolitePlant Proteins, DietarySodium Chloride

Identifiers

PMID25383373
PMCPMC4212599
OpenAlexW2117176999

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.