Evidence map›Paper›PMID 25382489›Full record

ArticleJournal of proteome research2014

In-line separation by capillary electrophoresis prior to analysis by top-down mass spectrometry enables sensitive characterization of protein complexes.

Xuemei Han, Yueju Wang, Aaron Aslanian, Bryan Fonslow, Beth Graczyk, Trisha N Davis, John R Yates

Abstract read
In one paragraph

Article in Journal of proteome research, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 45 papers.

0numbers the graph read from it
0cells of the map it votes in
45citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

45 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Capillary Electrophoresis-Mass Spectrometry for Top-Down Proteomics.Annual review of analytical chemistry (Palo Alto, Calif.) · 2025
    Review
  6. Article
  7. Article
  8. Review
  9. Article
  10. Top-down proteomics.Nature reviews. Methods primers · 2024
    Article
  11. Review
  12. Article
  13. Review
  14. Article
  15. Separation methods in single-cell proteomics: RPLC or CE?International journal of mass spectrometry · 2022
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Xuemei HanDepartment of Chemical Physiology, The Scripps Research Institute , 10550 North Torrey Pines Road, La Jolla, California 92037, United States.
Yueju Wang
Aaron Aslanian
Bryan Fonslow
Beth Graczyk
Trisha N Davis
John R Yates

Funding

TrainingP41GM103533 · NIGMS · UNIVERSITY OF WASHINGTON · PI MACCOSS, MICHAEL · 2012 to 2021
$20.7M
Quantitative Proteome Analysis of Brain DevelopmentR01MH067880 · NIMH · SCRIPPS RESEARCH INSTITUTE, THE · PI YATES III, JOHN R · 2003 to 2017
$7.1M
NHLBI NIH HHS HHSN268201000035CNIGMS NIH HHS 8P41GM103533-17NIGMS NIH HHS P41 GM103533NIMH NIH HHS R01 MH067880PHS HHS HHSN268201000035C
6 · The paper itself

Abstract

Intact protein analysis via top-down mass spectrometry (MS) provides a bird's eye view over the protein complexes and complex protein mixtures with the unique capability of characterizing protein variants, splice isoforms, and combinatorial post-translational modifications (PTMs). Here we applied capillary electrophoresis (CE) through a sheathless CE-electrospray ionization interface coupled to an LTQ Velos Orbitrap Elite mass spectrometer to analyze the Dam1 complex from Saccharomyces cerevisiae. We achieved a 100-fold increase in sensitivity compared to a reversed-phase liquid chromatography coupled MS analysis of recombinant Dam1 complex with a total loading of 2.5 ng (12 amol). N-terminal processing forms of individual subunits of the Dam1 complex were observed as well as their phosphorylation stoichiometry upon Mps1p kinase treatment.

Indexed as

Binding SitesCell Cycle ProteinsElectrophoresis, CapillaryMicrotubule-Associated ProteinsMolecular WeightPhosphorylationProtein Serine-Threonine KinasesProtein SubunitsProteomicsReproducibility of ResultsSaccharomyces cerevisiae ProteinsSpectrometry, Mass, Electrospray IonizationCell Cycle ProteinsDAM1 protein, S cerevisiaeMicrotubule-Associated ProteinsMPS1 protein, S cerevisiaeProtein Serine-Threonine KinasesProtein SubunitsSaccharomyces cerevisiae Proteinscapillary electrophoresisphosphorylation site mappingphosphorylation stoichiometrypost-translational modificationprotein complexestop-down mass spectrometry

Identifiers

PMID25382489
PMCPMC4262260

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.