Evidence map›Paper›PMID 25381351›Full record

ArticleThe Plant cell2014

Ectopic lignification in the flax lignified bast fiber1 mutant stem is associated with tissue-specific modifications in gene expression and cell wall composition.

Maxime Chantreau, Antoine Portelette, Rebecca Dauwe, Shingo Kiyoto, David Crônier, Kris Morreel, Sandrine Arribat, Godfrey Neutelings, Malika Chabi, Wout Boerjan and 5 more

Open access · bronzeAbstract read
In one paragraph

Article in The Plant cell, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 46 citations in OpenAlex.

  1. Review
  2. Article
  3. Metabolic diversity in a collection of wild and cultivatedFrontiers in molecular biosciences · 2022
    Article
  4. Review
  5. International journal of molecular sciences · 2020
    Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. BLISS: Shining a light on lignification in plants.Plant signaling & behavior · 2017
    Article
  11. Article
  12. A Key Role for Apoplastic HPlant physiology · 2017
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 8 institutions in 3 countries.

Maxime ChantreauUniversité Lille Nord de France, Lille 1, UMR1281, F-59650 Villeneuve d'Ascq Cedex, France INRA, UMR1281, Stress Abiotiques et Différenciation des Végétaux Cultivés, F-59650 Villeneuve d'Ascq, France.
Antoine PorteletteINRA, UMR614, Fractionnement des AgroRessources et Environnement, F-51100 Reims, France Université de Reims Champagne-Ardenne, UMR614, Fractionnement des AgroRessources et Environnement, F-51100 Reims, France.
Rebecca DauweUniversité de Picardie Jules Verne, EA 3900, BIOPI, Laboratoire de Phytotechnologie, F-80037 Amiens Cedex 1, France.
Shingo KiyotoINRA, UMR614, Fractionnement des AgroRessources et Environnement, F-51100 Reims, France Université de Reims Champagne-Ardenne, UMR614, Fractionnement des AgroRessources et Environnement, F-51100 Reims, France Laboratory of Tree Cell Biology, Division of Forest and Biomaterials Science, Graduate School of Agriculture, Kyoto University, Sakyo-ku, Kyoto 606-8502, Japan.
David CrônierINRA, UMR614, Fractionnement des AgroRessources et Environnement, F-51100 Reims, France Université de Reims Champagne-Ardenne, UMR614, Fractionnement des AgroRessources et Environnement, F-51100 Reims, France.
Kris MorreelDepartment of Plant Systems Biology, VIB, 9052 Gent, Belgium Department of Plant Biotechnology and Bioinformatics, UGent, 9052 Gent, Belgium.
Sandrine ArribatUniversité Lille Nord de France, Lille 1, UMR1281, F-59650 Villeneuve d'Ascq Cedex, France INRA, UMR1281, Stress Abiotiques et Différenciation des Végétaux Cultivés, F-59650 Villeneuve d'Ascq, France.
Godfrey NeutelingsUniversité Lille Nord de France, Lille 1, UMR1281, F-59650 Villeneuve d'Ascq Cedex, France INRA, UMR1281, Stress Abiotiques et Différenciation des Végétaux Cultivés, F-59650 Villeneuve d'Ascq, France.
Malika ChabiUniversité Lille Nord de France, Lille 1, UMR1281, F-59650 Villeneuve d'Ascq Cedex, France INRA, UMR1281, Stress Abiotiques et Différenciation des Végétaux Cultivés, F-59650 Villeneuve d'Ascq, France.
Wout BoerjanDepartment of Plant Systems Biology, VIB, 9052 Gent, Belgium Department of Plant Biotechnology and Bioinformatics, UGent, 9052 Gent, Belgium.
Arata YoshinagaLaboratory of Tree Cell Biology, Division of Forest and Biomaterials Science, Graduate School of Agriculture, Kyoto University, Sakyo-ku, Kyoto 606-8502, Japan.
François MesnardUniversité de Picardie Jules Verne, EA 3900, BIOPI, Laboratoire de Phytotechnologie, F-80037 Amiens Cedex 1, France.
Sebastien GrecUniversité Lille Nord de France, Lille 1, UMR1281, F-59650 Villeneuve d'Ascq Cedex, France INRA, UMR1281, Stress Abiotiques et Différenciation des Végétaux Cultivés, F-59650 Villeneuve d'Ascq, France.
Brigitte ChabbertINRA, UMR614, Fractionnement des AgroRessources et Environnement, F-51100 Reims, France Université de Reims Champagne-Ardenne, UMR614, Fractionnement des AgroRessources et Environnement, F-51100 Reims, France.
Simon HawkinsUniversité Lille Nord de France, Lille 1, UMR1281, F-59650 Villeneuve d'Ascq Cedex, France INRA, UMR1281, Stress Abiotiques et Différenciation des Végétaux Cultivés, F-59650 Villeneuve d'Ascq, France simon.hawkins@univ-lille1.fr.
Stress Abiotiques et Différenciation des Végétaux Cultivés · FRUniversité de Reims Champagne-Ardenne · FRUniversité de Picardie Jules Verne · FRUniversité Lille Nord de France · FRFractionnation of AgroResources and Environment · FRGhent University · BEKyoto University · JPVIB-UGent Center for Plant Systems Biology · BE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Histochemical screening of a flax ethyl methanesulfonate population led to the identification of 93 independent M2 mutant families showing ectopic lignification in the secondary cell wall of stem bast fibers. We named this core collection the Linum usitatissimum (flax) lbf mutants for lignified bast fibers and believe that this population represents a novel biological resource for investigating how bast fiber plants regulate lignin biosynthesis. As a proof of concept, we characterized the lbf1 mutant and showed that the lignin content increased by 350% in outer stem tissues containing bast fibers but was unchanged in inner stem tissues containing xylem. Chemical and NMR analyses indicated that bast fiber ectopic lignin was highly condensed and rich in G-units. Liquid chromatography-mass spectrometry profiling showed large modifications in the oligolignol pool of lbf1 inner- and outer-stem tissues that could be related to ectopic lignification. Immunological and chemical analyses revealed that lbf1 mutants also showed changes to other cell wall polymers. Whole-genome transcriptomics suggested that ectopic lignification of flax bast fibers could be caused by increased transcript accumulation of (1) the cinnamoyl-CoA reductase, cinnamyl alcohol dehydrogenase, and caffeic acid O-methyltransferase monolignol biosynthesis genes, (2) several lignin-associated peroxidase genes, and (3) genes coding for respiratory burst oxidase homolog NADPH-oxidases necessary to increase H2O2 supply.

Indexed as

Gene Expression Regulation, PlantAlcohol OxidoreductasesAldehyde OxidoreductasesCell WallComputational BiologyFlaxGene Expression ProfilingHydrogen PeroxideLigninMethyltransferasesMutationOligonucleotide Array Sequence AnalysisOrgan SpecificityPhylogenyPlant ProteinsPlants, Genetically ModifiedAlcohol OxidoreductasesAldehyde Oxidoreductasescaffeate O-methyltransferasecinnamoyl CoA reductasecinnamyl alcohol dehydrogenaseHydrogen PeroxideLigninMethyltransferasesPlant Proteins

Identifiers

PMID25381351
PMCPMC4277216
OpenAlexW2129461718

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.