Evidence map›Paper›PMID 25379645›Full record

ArticleMolecules (Basel, Switzerland)2014

Analysis on the interaction domain of VirG and apyrase by pull-down assay.

Yu Wang, Guo-Hua Gong, Wei Zhou, Bin Zhang, Shu-Yin Bao, Cheng-Xi Wei, Jun-Jie Yue, Yan-Fen Zhang

Open access · goldAbstract read
In one paragraph

Article in Molecules (Basel, Switzerland), 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.5field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 6 citations in OpenAlex.

  1. Characterization ofApplied and environmental microbiology · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Yu WangMedicinal Chemistry and Pharmacology Institute, Inner Mongolia University for Nationalities, Tongliao 028000, China.
Guo-Hua GongMedicinal Chemistry and Pharmacology Institute, Inner Mongolia University for Nationalities, Tongliao 028000, China.
Wei ZhouState Key Laboratory of Medical Microbiology and Biosafety, Academy of Military Medical Sciences, Biotechnology Institute of Beijing, Beijing 100071, China.
Bin ZhangMedicinal Chemistry and Pharmacology Institute, Inner Mongolia University for Nationalities, Tongliao 028000, China.
Shu-Yin BaoMedicinal Chemistry and Pharmacology Institute, Inner Mongolia University for Nationalities, Tongliao 028000, China.
Cheng-Xi WeiMedicinal Chemistry and Pharmacology Institute, Inner Mongolia University for Nationalities, Tongliao 028000, China.
Jun-Jie YueState Key Laboratory of Medical Microbiology and Biosafety, Academy of Military Medical Sciences, Biotechnology Institute of Beijing, Beijing 100071, China. yue_junjie@126.com.
Yan-Fen ZhangTongliao Hospital, Tongliao 028000, China. zyf19991@126.com.
Inner Mongolia University for Nationalities · CNAcademy of Military Medical Sciences · CNTongliao Academy of Agricultural Sciences · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

VirG is outer membrane protein of Shigella and affects the spread of Shigella. Recently it has been reported that apyrase influences the location of VirG, although the underlying mechanism remains poorly understood. The site of interaction between apyrase and VirG is the focus of our research. First we constructed recombinant plasmid pHIS-phoN2 and pS-(v1-1102, v53-758, v759-1102, v53-319, v320-507, v507-758) by denaturation-renaturation, the phoN2:kan mutant of Shigella flexneri 5a M90T by a modified version of the lambda red recombination protocol originally described by Datsenko and Wanner and the complemented strain M90TΔphoN2/pET24a(PhisphoN2). Second, the recombinant plasmid pHIS-phoN2 and the pS-(v1-1102, v53-758, v759-1102, v53-319, v320-507, v507-758) were transformed into E. coli BL21 (DE3) and induced to express the fusion proteins. Third, the fusion proteins were purified and the interaction of VirG and apyrase was identified by pull-down. Fourth, VirG was divided and the interaction site of apyrase and VirG was determined. Finally, how apyrase affects the function of VirG was analyzed by immunofluorescence. Accordingly, the results provided the data supporting the fact that apyrase combines with the α-domain of VirG to influence the function of VirG.

Indexed as

ApyraseBacterial ProteinsDNA-Binding ProteinsProtein BindingProtein Structure, TertiaryShigella flexneriTranscription FactorsApyraseBacterial ProteinsDNA-Binding ProteinsTranscription FactorsvirG protein, Shigella flexneri

Identifiers

PMID25379645
PMCPMC6271496
OpenAlexW2051192411

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.