Evidence map›Paper›PMID 25378893›Full record

ArticleJournal of computational and graphical statistics : a joint publication of American Statistical Association, Institute of Mathematical Statistics, Interface Foundation of North America2014

Bayesian Semiparametric Density Deconvolution in the Presence of Conditionally Heteroscedastic Measurement Errors.

Abhra Sarkar, Bani K Mallick, John Staudenmayer, Debdeep Pati, Raymond J Carroll

Abstract read
In one paragraph

Article in Journal of computational and graphical statistics : a joint publication of American Statistical Association, Institute of Mathematical Statistics, Interface Foundation of North America, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Bayesian Semiparametric Multivariate Density Deconvolution.Journal of the American Statistical Association · 2018
    Article
  7. Article
  8. False discovery rates: a new deal.Biostatistics (Oxford, England) · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Abhra SarkarDepartment of Statistics, Texas A&M University, 3143 TAMU, College Station, TX 77843-3143 USA.
Bani K MallickDepartment of Statistics, Texas A&M University, 3143 TAMU, College Station, TX 77843-3143 USA.
John StaudenmayerDepartment of Mathematics and Statistics, University of Massachusetts, Amherst, MA 01003-9305 USA.
Debdeep PatiDepartment of Statistics, Florida State University, Tallahassee, FL 32306-4330 USA.
Raymond J CarrollDepartment of Statistics, Texas A&M University, 3143 TAMU, College Station, TX 77843-3143 USA.

Funding

Measurement Error, Nutrition and Breast/Colon CancerR37CA057030 · NCI · TEXAS A&M UNIVERSITY SYSTEM · PI CARROLL, RAYMOND J. · 2005 to 2014
$3.3M
Novel Analytic Techniques to Assess Physical ActivityR01CA121005 · NCI · UNIVERSITY OF MASSACHUSETTS AMHERST · PI FREEDSON, PATTY S. · 2006 to 2010
$1.5M
MEASUREMENT ERROR, NUTRITION AND BREAST/COLON CANCERR01CA057030 · NCI · TEXAS A&M UNIVERSITY SYSTEM · PI CARROLL, RAYMOND J. · 1992 to 2004
$1.3M
Advancing Physical Activity Measurement Using Pattern Recognition TechniquesRC1HL099557 · NHLBI · UNIVERSITY OF MASSACHUSETTS AMHERST · PI FREEDSON, PATTY S. · 2009 to 2010
$985k
NCI NIH HHS R01 CA057030NCI NIH HHS R01 CA121005NCI NIH HHS R37 CA057030NHLBI NIH HHS RC1 HL099557
6 · The paper itself

Abstract

We consider the problem of estimating the density of a random variable when precise measurements on the variable are not available, but replicated proxies contaminated with measurement error are available for sufficiently many subjects. Under the assumption of additive measurement errors this reduces to a problem of deconvolution of densities. Deconvolution methods often make restrictive and unrealistic assumptions about the density of interest and the distribution of measurement errors, e.g., normality and homoscedasticity and thus independence from the variable of interest. This article relaxes these assumptions and introduces novel Bayesian semiparametric methodology based on Dirichlet process mixture models for robust deconvolution of densities in the presence of conditionally heteroscedastic measurement errors. In particular, the models can adapt to asymmetry, heavy tails and multimodality. In simulation experiments, we show that our methods vastly outperform a recent Bayesian approach based on estimating the densities via mixtures of splines. We apply our methods to data from nutritional epidemiology. Even in the special case when the measurement errors are homoscedastic, our methodology is novel and dominates other methods that have been proposed previously. Additional simulation results, instructions on getting access to the data set and R programs implementing our methods are included as part of online supplemental materials.

Indexed as

B-splineConditional heteroscedasticityDensity deconvolutionDirichlet process mixture modelsMeasurement errorsSkew-normal distributionVariance function

Identifiers

PMID25378893
PMCPMC4219602

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.