Evidence map›Paper›PMID 25378697›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2015

Angelman syndrome imprinting center encodes a transcriptional promoter.

Michael W Lewis, Jason O Brant, Joseph M Kramer, James I Moss, Thomas P Yang, Peter J Hansen, R Stan Williams, James L Resnick

Erratum issuedOpen access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
4.2field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 40 citations in OpenAlex.

  1. Trial
  2. Review
  3. Epigenetics in Prader-Willi Syndrome.Frontiers in genetics · 2021
    Review
  4. Article
  5. Article
  6. Review
  7. Review
  8. Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Pharmacological therapies for Angelman syndrome.Wiener medizinische Wochenschrift (1946) · 2017
    Review
  15. Article
  16. Review
  17. Article
  18. Article
  19. Genomic Imprinting.Open access Macedonian journal of medical sciences · 2016
    Review
  20. Angelman Syndrome: A Case Report.Iranian journal of child neurology · 2016
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Michael W LewisDepartment of Molecular Genetics and Microbiology, University of Florida College of Medicine, Gainesville, FL 32610-0266;
Jason O BrantDepartment of Biochemistry and Molecular Biology, University of Florida College of Medicine, Gainesville, FL 32610-0245;
Joseph M KramerDepartment of Obstetrics and Gynecology, University of Florida College of Medicine, Gainesville, FL 32610-0294; and.
James I MossDepartment of Animal Sciences, University of Florida, Gainesville, FL 32611-0910.
Thomas P YangDepartment of Biochemistry and Molecular Biology, University of Florida College of Medicine, Gainesville, FL 32610-0245;
Peter J HansenDepartment of Animal Sciences, University of Florida, Gainesville, FL 32611-0910.
R Stan WilliamsDepartment of Obstetrics and Gynecology, University of Florida College of Medicine, Gainesville, FL 32610-0294; and.
James L ResnickDepartment of Molecular Genetics and Microbiology, University of Florida College of Medicine, Gainesville, FL 32610-0266; resnick@mgm.ufl.edu.
University of Florida · USFlorida College · US

Funding

Using social networks to map and evaluate team science across CTSA hubsUL1TR001427 · NCATS · UNIVERSITY OF FLORIDA · PI MITCHELL, DUANE A. · 2015 to 2024
$37.2M
Imprinting defects leading to Angelman and Prader Willi syndromesR01NS086456 · NINDS · UNIVERSITY OF FLORIDA · PI RESNICK, JAMES L · 2013 to 2017
$1.6M
NCATS NIH HHS UL1 TR001427NINDS NIH HHS NS068456NINDS NIH HHS R01 NS086456
6 · The paper itself

Abstract

Clusters of imprinted genes are often controlled by an imprinting center that is necessary for allele-specific gene expression and to reprogram parent-of-origin information between generations. An imprinted domain at 15q11-q13 is responsible for both Angelman syndrome (AS) and Prader-Willi syndrome (PWS), two clinically distinct neurodevelopmental disorders. Angelman syndrome arises from the lack of maternal contribution from the locus, whereas Prader-Willi syndrome results from the absence of paternally expressed genes. In some rare cases of PWS and AS, small deletions may lead to incorrect parent-of-origin allele identity. DNA sequences common to these deletions define a bipartite imprinting center for the AS-PWS locus. The PWS-smallest region of deletion overlap (SRO) element of the imprinting center activates expression of genes from the paternal allele. The AS-SRO element generates maternal allele identity by epigenetically inactivating the PWS-SRO in oocytes so that paternal genes are silenced on the future maternal allele. Here we have investigated functional activities of the AS-SRO, the element necessary for maternal allele identity. We find that, in humans, the AS-SRO is an oocyte-specific promoter that generates transcripts that transit the PWS-SRO. Similar upstream promoters were detected in bovine oocytes. This result is consistent with a model in which imprinting centers become DNA methylated and acquire maternal allele identity in oocytes in response to transiting transcription.

Indexed as

Models, BiologicalAngelman SyndromeAnimalsCattleDNA MethylationDNA PrimersGene ComponentsGene Expression RegulationGenomic ImprintingHumansOocytesPrader-Willi SyndromePromoter Regions, GeneticReverse Transcriptase Polymerase Chain ReactionSequence Analysis, RNAsnRNP Core ProteinsDNA PrimerssnRNP Core ProteinsSNRPN protein, humanAngelman syndromeimprintingoocytes

Identifiers

PMID25378697
PMCPMC4460480
OpenAlexW2146567912

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.