Evidence map›Paper›PMID 25378692›Full record

ArticlePlant physiology2015

Transgenic perturbation of the decarboxylation phase of Crassulacean acid metabolism alters physiology and metabolism but has only a small effect on growth.

Louisa V Dever, Susanna F Boxall, Jana Kneřová, James Hartwell

Open access · bronzeAbstract read
In one paragraph

Article in Plant physiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 75 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Synthetic crassulacean acid metabolism (SynCAM) for improving water-use efficiency in plants.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2025
    Review
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
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  13. Article
  14. Review
  15. Circadian regulation of metabolism across photosynthetic organisms.The Plant journal : for cell and molecular biology · 2023
    Review
  16. Review
  17. CAM photosynthesis: the acid test.The New phytologist · 2022
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Louisa V DeverDepartment of Plant Sciences, Institute of Integrative Biology, University of Liverpool, Liverpool L69 7ZB, United Kingdom.
Susanna F BoxallDepartment of Plant Sciences, Institute of Integrative Biology, University of Liverpool, Liverpool L69 7ZB, United Kingdom.
Jana KneřováDepartment of Plant Sciences, Institute of Integrative Biology, University of Liverpool, Liverpool L69 7ZB, United Kingdom.
James HartwellDepartment of Plant Sciences, Institute of Integrative Biology, University of Liverpool, Liverpool L69 7ZB, United Kingdom hartwell@liv.ac.uk.ORCID http://orcid.org/0000-0001-5000-223X
University of Liverpool · GB

Funding

Biotechnology and Biological Sciences Research Council BB/F009313/1
6 · The paper itself

Abstract

Mitochondrial NAD-malic enzyme (ME) and/or cytosolic/plastidic NADP-ME combined with the cytosolic/plastidic pyruvate orthophosphate dikinase (PPDK) catalyze two key steps during light-period malate decarboxylation that underpin secondary CO(2) fixation in some Crassulacean acid metabolism (CAM) species. We report the generation and phenotypic characterization of transgenic RNA interference lines of the obligate CAM species Kalanchoë fedtschenkoi with reduced activities of NAD-ME or PPDK. Transgenic line rNAD-ME1 had 8%, and rPPDK1 had 5% of the wild-type level of activity, and showed dramatic changes in the light/dark cycle of CAM CO(2) fixation. In well-watered conditions, these lines fixed all of their CO(2) in the light; they thus performed C(3) photosynthesis. The alternative malate decarboxylase, NADP-ME, did not appear to compensate for the reduction in NAD-ME, suggesting that NAD-ME was the key decarboxylase for CAM. The activity of other CAM enzymes was reduced as a consequence of knocking out either NAD-ME or PPDK activity, particularly phosphoenolpyruvate carboxylase (PPC) and PPDK in rNAD-ME1. Furthermore, the circadian clock-controlled phosphorylation of PPC in the dark was reduced in both lines, especially in rNAD-ME1. This had the consequence that circadian rhythms of PPC phosphorylation, PPC kinase transcript levels and activity, and the classic circadian rhythm of CAM CO(2) fixation were lost, or dampened toward arrhythmia, under constant light and temperature conditions. Surprisingly, oscillations in the transcript abundance of core circadian clock genes also became arrhythmic in the rNAD-ME1 line, suggesting that perturbing CAM in K. fedtschenkoi feeds back to perturb the central circadian clock.

Indexed as

Circadian RhythmDecarboxylationDehydrationGene Knockout TechniquesKalanchoeMalate DehydrogenaseMalatesPhosphorylationPhotosynthesisPlants, Genetically ModifiedPyruvate, Orthophosphate DikinaseStarchMalate Dehydrogenasemalate dehydrogenase-(oxaloacetate-decarboxylating) (NAD+)malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+)Malatesmalic acidPyruvate, Orthophosphate DikinaseStarch

Identifiers

PMID25378692
PMCPMC4281012
OpenAlexW1968209592

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.