Evidence map›Paper›PMID 25378474›Full record

ArticleG3 (Bethesda, Md.)2014

A Shigella flexneri virulence plasmid encoded factor controls production of outer membrane vesicles.

Saima Sidik, Haila Kottwitz, Jeremy Benjamin, Julie Ryu, Ameer Jarrar, Rafael Garduno, John R Rohde

Open access · goldAbstract read
In one paragraph

Article in G3 (Bethesda, Md.), 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
1.7field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 34 citations in OpenAlex.

  1. bioRxiv : the preprint server for biology · 2026
    Article
  2. Review
  3. Deficiency in theMicroorganisms · 2025
    Article
  4. Article
  5. Review
  6. Article
  7. Review
  8. Outer Membrane Vesicle Vaccine Platforms.BioDrugs : clinical immunotherapeutics, biopharmaceuticals and gene therapy · 2024
    Review
  9. Article
  10. A Tale aboutMicroorganisms · 2023
    Review
  11. Article
  12. Shigella Outer Membrane Vesicles as Promising Targets for Vaccination.International journal of molecular sciences · 2022
    Review
  13. The T3SS ofMicroorganisms · 2020
    Review
  14. Article
  15. Article
  16. Article
  17. Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Saima SidikDepartment of Microbiology and Immunology, Dalhousie University Halifax, NS, Canada B3H 4R2.
Haila KottwitzDepartment of Microbiology and Immunology, Dalhousie University Halifax, NS, Canada B3H 4R2.
Jeremy BenjaminDepartment of Microbiology and Immunology, Dalhousie University Halifax, NS, Canada B3H 4R2.
Julie RyuDepartment of Microbiology and Immunology, Dalhousie University Halifax, NS, Canada B3H 4R2.
Ameer JarrarDepartment of Microbiology and Immunology, Dalhousie University Halifax, NS, Canada B3H 4R2.
Rafael GardunoCanadian Food Inspection Agency, Dartmouth Laboratory, Dartmouth, NS Canada B3B 1Y9.
John R RohdeDepartment of Microbiology and Immunology, Dalhousie University Halifax, NS, Canada B3H 4R2 john.rohde@dal.ca.
Dalhousie University · CACanadian Food Inspection Agency · CA

Funding

Canadian Institutes of Health Research MOP-102594
6 · The paper itself

Abstract

Shigella spp. use a repertoire of virulence plasmid-encoded factors to cause shigellosis. These include components of a Type III Secretion Apparatus (T3SA) that is required for invasion of epithelial cells and many genes of unknown function. We constructed an array of 99 deletion mutants comprising all genes encoded by the virulence plasmid (excluding those known to be required for plasmid maintenance) of Shigella flexneri. We screened these mutants for their ability to bind the dye Congo red: an indicator of T3SA function. This screen focused our attention on an operon encoding genes that modify the cell envelope including virK, a gene of partially characterized function. We discovered that virK is required for controlled release of proteins to the culture supernatant. Mutations in virK result in a temperature-dependent overproduction of outer membrane vesicles (OMVs). The periplasmic chaperone/protease DegP, a known regulator of OMV production in Escherichia coli (encoded by a chromosomal gene), was found to similarly control OMV production in S. flexneri. Both virK and degP show genetic interactions with mxiD, a structural component of the T3SA. Our results are consistent with a model in which VirK and DegP relieve the periplasmic stress that accompanies assembly of the T3SA.

Indexed as

Bacterial Outer Membrane ProteinsBacterial ProteinsCongo RedEscherichia coliGenes, BacterialHeLa CellsHumansMutationPeriplasmic ProteinsPlasmidsSecretory VesiclesShigella flexneriTemperatureVirulenceBacterial Outer Membrane ProteinsBacterial ProteinsCongo RedMxiD protein, ShigellaPeriplasmic Proteinsouter membrane vesiclesShigellavirulence

Identifiers

PMID25378474
PMCPMC4267944
OpenAlexW2114801075

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.