Evidence map›Paper›PMID 25377889›Full record

ArticleBMC genomics2014

Lassa and Marburg viruses elicit distinct host transcriptional responses early after infection.

Ignacio S Caballero, Judy Y Yen, Lisa E Hensley, Anna N Honko, Arthur J Goff, John H Connor

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 37 citations in OpenAlex.

  1. Article
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  4. Transcriptional Profiling of Filovirus-Infected Nonhuman Primate Samples.Methods in molecular biology (Clifton, N.J.) · 2025
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  10. CD169 and CD64 could help differentiate bacterial from CoVID-19 or other viral infections in the Emergency Department.Cytometry. Part A : the journal of the International Society for Analytical Cytology · 2021
    Observational
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 1 country.

Ignacio S CaballeroBioinformatics Graduate Program, Boston University, 24 Cummington St, Boston, MA 02215, USA. nacho@bu.edu.
Judy Y Yen
Lisa E Hensley
Anna N Honko
Arthur J Goff
John H Connor
Boston University · USNational Institute of Allergy and Infectious Diseases · USNational Institutes of Health · USUnited States Army Medical Research Institute of Infectious Diseases · US

Funding

NIAID NIH HHS AI1096159
6 · The paper itself

Abstract

backgroundLassa virus and Marburg virus are two causative agents of viral hemorrhagic fever. Their diagnosis is difficult because patients infected with either pathogen present similar nonspecific symptoms early after infection. Current diagnostic tests are based on detecting viral proteins or nucleic acids in the blood, but these cannot be found during the early stages of disease, before the virus starts replicating in the blood. Using the transcriptional response of the host during infection can lead to earlier diagnoses compared to those of traditional methods.

resultsIn this study, we use RNA sequencing to obtain a high-resolution view of the in vivo transcriptional dynamics of peripheral blood mononuclear cells (PBMCs) throughout both types of infection. We report a subset of host mRNAs, including heat-shock proteins like HSPA1B, immunoglobulins like IGJ, and cell adhesion molecules like SIGLEC1, whose differences in expression are strong enough to distinguish Lassa infection from Marburg infection in non-human primates. We have validated these infection-specific expression differences by using microarrays on a larger set of samples, and by quantifying the expression of individual genes using RT-PCR.

conclusionsThese results suggest that host transcriptional signatures are correlated with specific viral infections, and that they can be used to identify highly pathogenic viruses during the early stages of disease, before standard detection methods become effective.

Indexed as

Lassa virusMarburgvirusTranscription, GeneticAnimalsFemaleGene Expression ProfilingGene Expression RegulationHemorrhagic Fevers, ViralHost-Pathogen InteractionsInterferon Type ILeukocytes, MononuclearMacaca fascicularisMaleMonkey DiseasesReproducibility of ResultsSequence Analysis, RNAInterferon Type I

Identifiers

PMID25377889
PMCPMC4232721
OpenAlexW1987222249

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.