Evidence map›Paper›PMID 25377721›Full record

ArticleScientific reports2014

Understanding of how Propionibacterium acidipropionici respond to propionic acid stress at the level of proteomics.

Ningzi Guan, Hyun-dong Shin, Rachel R Chen, Jianghua Li, Long Liu, Guocheng Du, Jian Chen

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
2.4field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 53 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Microbial response to acid stress: mechanisms and applications.Applied microbiology and biotechnology · 2020
    Review
  9. Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Review
  15. Article
  16. Long-term adaptive evolution ofBiotechnology for biofuels · 2016
    Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Ningzi Guan1] Key Laboratory of Carbohydrate Chemistry and Biotechnology, Ministry of Education, Jiangnan University, Wuxi 214122, China [2] Key Laboratory of Industrial Biotechnology, Ministry of Education, Jiangnan University, Wuxi 214122, China.
Hyun-dong ShinSchool of Chemical and Biomolecular Engineering, Georgia Institute of Technology, Atlanta 30332, USA.
Rachel R ChenSchool of Chemical and Biomolecular Engineering, Georgia Institute of Technology, Atlanta 30332, USA.
Jianghua Li1] Key Laboratory of Carbohydrate Chemistry and Biotechnology, Ministry of Education, Jiangnan University, Wuxi 214122, China [2] Synergetic Innovation Center Of Food Safety and Nutrition, Wuxi 214122, China.
Long Liu1] Key Laboratory of Carbohydrate Chemistry and Biotechnology, Ministry of Education, Jiangnan University, Wuxi 214122, China [2] Synergetic Innovation Center Of Food Safety and Nutrition, Wuxi 214122, China.
Guocheng DuSynergetic Innovation Center Of Food Safety and Nutrition, Wuxi 214122, China.
Jian ChenSynergetic Innovation Center Of Food Safety and Nutrition, Wuxi 214122, China.
The Synergetic Innovation Center for Advanced Materials · CNGeorgia Institute of Technology · USJiangnan University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Propionic acid (PA) is an important platform chemical in the food, agriculture, and pharmaceutical industries and is mainly biosynthesized by propionibacteria. Acid tolerance in PA-producing strains is crucial. In previous work, we investigated the acid tolerance mechanism of Propionibacterium acidipropionici at microenvironmental levels by analyzing physiological changes in the parental strain and three PA-tolerant mutants obtained by genome shuffling. However, the molecular mechanism of PA tolerance in P. acidipropionici remained unclear. Here, we performed a comparative proteomics study of P. acidipropionici CGMCC 1.2230 and the acid-tolerant mutant P. acidipropionici WSH1105; MALDI-TOF/MS identified 24 proteins that significantly differed between the parental and shuffled strains. The differentially expressed proteins were mainly categorized as key components of crucial biological processes and the acid stress response. Quantitative reverse transcriptase polymerase chain reaction (qRT-PCR) was used to confirm differential expression of nine key proteins. Overexpression of the secretory protein glyceraldehyde-3-phosphate dehydrogenase and ATP synthase subunit α in Escherichia coli BL21 improved PA and acetic acid tolerance; overexpression of NADH dehydrogenase and methylmalonyl-CoA epimerase improved PA tolerance. These results provide new insights into the acid tolerance of P. acidipropionici and will facilitate the development of PA production through fermentation by propionibacteria.

Indexed as

Gene Expression Regulation, BacterialProteomicsAcetic AcidAdaptation, PhysiologicalBacterial ProteinsBacterial Proton-Translocating ATPasesDNA ShufflingEscherichia coliEscherichia coli ProteinsFermentationGlyceraldehyde-3-Phosphate Dehydrogenase (Phosphorylating)NADH DehydrogenasePropionatesPropionibacteriumRacemases and EpimerasesStress, PhysiologicalAcetic AcidatpB protein, E coliBacterial ProteinsBacterial Proton-Translocating ATPasesEscherichia coli ProteinsGlyceraldehyde-3-Phosphate Dehydrogenase (Phosphorylating)methylmalonyl-coenzyme A racemaseNADH DehydrogenasePropionatespropionic acidRacemases and Epimerases

Identifiers

PMID25377721
PMCPMC4223659
OpenAlexW2093900233

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.