Evidence map›Paper›PMID 25375852›Full record

ArticlePloS one2014

Transcriptomic changes triggered by hypoxia: evidence for HIF-1α-independent, [Na+]i/[K+]i-mediated, excitation-transcription coupling.

Svetlana V Koltsova, Boris Shilov, Julia G Birulina, Olga A Akimova, Mounsif Haloui, Leonid V Kapilevich, Svetlana V Gusakova, Johanne Tremblay, Pavel Hamet, Sergei N Orlov

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.7field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 30 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Eplerenone-Resistant Salt-Sensitive Hypertension in Nedd4-2 C2 KO Mice.International journal of molecular sciences · 2017
    Article
  8. Na⁺Molecules (Basel, Switzerland) · 2017
    Review
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Salt and gene expression: evidence for [Na+]i/[K+]i-mediated signaling pathways.Pflugers Archiv : European journal of physiology · 2015
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 2 countries.

Svetlana V KoltsovaDepartment of Biology, Moscow State University, Moscow, Russia; Department of Medicine, Centre de recherche, Centre hospitalier de l'Université de Montréal, Montreal, Quebec, Canada.
Boris ShilovDepartment of Physiology, Pirogov Russian National Research Medical University, Moscow, Russia.
Julia G BirulinaDepartment of Medical Biology, Siberian State Medical University, Tomsk, Russia.
Olga A AkimovaDepartment of Biology, Moscow State University, Moscow, Russia.
Mounsif HalouiDepartment of Medicine, Centre de recherche, Centre hospitalier de l'Université de Montréal, Montreal, Quebec, Canada.
Leonid V KapilevichDepartment of Medical Biology, Siberian State Medical University, Tomsk, Russia; Department of Physical Education, Tomsk State University, Tomsk, Russia.
Svetlana V GusakovaDepartment of Medical Biology, Siberian State Medical University, Tomsk, Russia.
Johanne TremblayDepartment of Medicine, Centre de recherche, Centre hospitalier de l'Université de Montréal, Montreal, Quebec, Canada.
Pavel HametDepartment of Medicine, Centre de recherche, Centre hospitalier de l'Université de Montréal, Montreal, Quebec, Canada.
Sergei N OrlovDepartment of Biology, Moscow State University, Moscow, Russia; Department of Medicine, Centre de recherche, Centre hospitalier de l'Université de Montréal, Montreal, Quebec, Canada; Department of Medical Biology, Siberian State Medical University, Tomsk, Russia.
Centre Hospitalier de l’Université de Montréal · CALomonosov Moscow State University · RUSiberian State Medical University · RUNational Research Tomsk State University · RUPirogov Russian National Research Medical University · RU

Funding

Canadian Institutes of Health Research
6 · The paper itself

Abstract

This study examines the relative impact of canonical hypoxia-inducible factor-1alpha- (HIF-1α and Na+i/K+i-mediated signaling on transcriptomic changes evoked by hypoxia and glucose deprivation. Incubation of RASMC in ischemic conditions resulted in ∼3-fold elevation of [Na+]i and 2-fold reduction of [K+]i. Using global gene expression profiling we found that Na+,K+-ATPase inhibition by ouabain or K+-free medium in rat aortic vascular smooth muscle cells (RASMC) led to the differential expression of dozens of genes whose altered expression was previously detected in cells subjected to hypoxia and ischemia/reperfusion. For further investigations, we selected Cyp1a1, Fos, Atf3, Klf10, Ptgs2, Nr4a1, Per2 and Hes1, i.e. genes possessing the highest increments of expression under sustained Na+,K+-ATPase inhibition and whose implication in the pathogenesis of hypoxia was proved in previous studies. In ouabain-treated RASMC, low-Na+, high-K+ medium abolished amplification of the [Na+]i/[K+]i ratio as well as the increased expression of all tested genes. In cells subjected to hypoxia and glucose deprivation, dissipation of the transmembrane gradient of Na+ and K+ completely eliminated increment of Fos, Atf3, Ptgs2 and Per2 mRNAs and sharply diminished augmentation expression of Klf10, Edn1, Nr4a1 and Hes1. In contrast to low-Na+, high-K+ medium, RASMC transfection with Hif-1a siRNA attenuated increments of Vegfa, Edn1, Klf10 and Nr4a1 mRNAs triggered by hypoxia but did not impact Fos, Atf3, Ptgs2 and Per2 expression. Thus, our investigation demonstrates, for the first time, that Na+i/K+i-mediated, Hif-1α- -independent excitation-transcription coupling contributes to transcriptomic changes evoked in RASMC by hypoxia and glucose deprivation.

Indexed as

Gene Expression RegulationTranscriptomeAnimalsEnzyme InhibitorsHypoxiaHypoxia-Inducible Factor 1, alpha SubunitMuscle, Smooth, VascularMyocytes, Smooth MuscleOuabainRatsSignal TransductionSodium-Potassium-Exchanging ATPaseEnzyme InhibitorsHif1a protein, ratHypoxia-Inducible Factor 1, alpha SubunitOuabainSodium-Potassium-Exchanging ATPase

Identifiers

PMID25375852
PMCPMC4222758
OpenAlexW2069295886

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.