ArticlePloS one2014
Genome-wide classification and evolutionary and expression analyses of citrus MYB transcription factor families in sweet orange.
Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.
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28 citing papers in PubMed, 75 citations in OpenAlex.
- Genome-wide identification, expression analysis of the R2R3-MYB gene family and their potential roles under cold stress in Prunus sibirica.BMC genomics · 2024Article
- Petunia as a model for MYB transcription factor action under salt stress.Frontiers in plant science · 2023Article
- Molecular Cloning and Characterization ofInternational journal of molecular sciences · 2022Article
- Identification and Expression Analysis of R2R3-MYB Family Genes Associated with Salt Tolerance inInternational journal of molecular sciences · 2022Article
- MYB transcription factor family in sweet cherry (Prunus avium L.): genome-wide investigation, evolution, structure, characterization and expression patterns.BMC plant biology · 2022Article
- Genome-wide identification of acyl-CoA binding proteins and possible functional prediction in legumes.Frontiers in genetics · 2022Article
- Global Survey, Expressions and Association Analysis ofFrontiers in genetics · 2022Article
- Genome-Wide Identification and Expression Analysis ofInternational journal of molecular sciences · 2021Article
- Genome-Wide Characterization and Expression Analysis of theInternational journal of molecular sciences · 2021Article
- Systematic analysis of differentially expressedPhysiology and molecular biology of plants : an international journal of functional plant biology · 2021Article
- Genome-wide survey of the F-box/Kelch (FBK) members and molecular identification of a novel FBK gene TaAFR in wheat.PloS one · 2021Article
- Genome-Wide Analysis ofFrontiers in plant science · 2021Article
- Functional identification of PsMYB57 involved in anthocyanin regulation of tree peony.BMC genetics · 2020Article
- Insights into the Diversification and Evolution of R2R3-MYB Transcription Factors in Plants.Plant physiology · 2020Article
- Genome-Wide Identification and Comparative Analysis of MYB Transcription Factor Family inPlants (Basel, Switzerland) · 2020Article
- Genome-wide identification, expression, and association analysis of the monosaccharide transporter (MST) gene family in peanut (3 Biotech · 2020Article
- Article
- Rootstock-induced molecular responses associated with drought tolerance in sweet orange as revealed by RNA-Seq.BMC genomics · 2019Article
- Article
- Genome-Wide Characterization and Expression Analyses ofInternational journal of molecular sciences · 2018Article
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Authors and funding
5 authors at 1 institution in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
MYB family genes are widely distributed in plants and comprise one of the largest transcription factors involved in various developmental processes and defense responses of plants. To date, few MYB genes and little expression profiling have been reported for citrus. Here, we describe and classify 177 members of the sweet orange MYB gene (CsMYB) family in terms of their genomic gene structures and similarity to their putative Arabidopsis orthologs. According to these analyses, these CsMYBs were categorized into four groups (4R-MYB, 3R-MYB, 2R-MYB and 1R-MYB). Gene structure analysis revealed that 1R-MYB genes possess relatively more introns as compared with 2R-MYB genes. Investigation of their chromosomal localizations revealed that these CsMYBs are distributed across nine chromosomes. Sweet orange includes a relatively small number of MYB genes compared with the 198 members in Arabidopsis, presumably due to a paralog reduction related to repetitive sequence insertion into promoter and non-coding transcribed region of the genes. Comparative studies of CsMYBs and Arabidopsis showed that CsMYBs had fewer gene duplication events. Expression analysis revealed that the MYB gene family has a wide expression profile in sweet orange development and plays important roles in development and stress responses. In addition, 337 new putative microsatellites with flanking sequences sufficient for primer design were also identified from the 177 CsMYBs. These results provide a useful reference for the selection of candidate MYB genes for cloning and further functional analysis forcitrus.
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