Evidence map›Paper›PMID 25375177›Full record

ArticlePloS one2014

Novel matrix proteins of Pteria penguin pearl oyster shell nacre homologous to the jacalin-related β-prism fold lectins.

Takako Naganuma, Wataru Hoshino, Yukihiro Shikanai, Rie Sato, Kaiyue Liu, Saho Sato, Koji Muramoto, Makoto Osada, Kyosuke Yoshimi, Tomohisa Ogawa

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.3field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 18 citations in OpenAlex.

  1. Diversified Biomineralization Roles ofInternational journal of molecular sciences · 2021
    Article
  2. Glycan Binding Profiling of Jacalin-Related Lectins from theInternational journal of molecular sciences · 2019
    Article
  3. Article
  4. International journal of molecular sciences · 2018
    Article
  5. Review
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Takako NaganumaThe Department of Biomolecular Sciences, Graduate School of Life Sciences, Tohoku University, Sendai 980-8577, Japan; Center for Interdisciplinary Research, Tohoku University, Sendai 980-8578, Japan.
Wataru HoshinoThe Department of Biomolecular Sciences, Graduate School of Life Sciences, Tohoku University, Sendai 980-8577, Japan.
Yukihiro ShikanaiThe Department of Biomolecular Sciences, Graduate School of Life Sciences, Tohoku University, Sendai 980-8577, Japan.
Rie SatoThe Department of Biomolecular Sciences, Graduate School of Life Sciences, Tohoku University, Sendai 980-8577, Japan.
Kaiyue LiuThe Department of Biomolecular Sciences, Graduate School of Life Sciences, Tohoku University, Sendai 980-8577, Japan.
Saho SatoThe Department of Biomolecular Sciences, Graduate School of Life Sciences, Tohoku University, Sendai 980-8577, Japan.
Koji MuramotoThe Department of Biomolecular Sciences, Graduate School of Life Sciences, Tohoku University, Sendai 980-8577, Japan.
Makoto OsadaCenter for Interdisciplinary Research, Tohoku University, Sendai 980-8578, Japan; Graduate School of Agricultural Science, Tohoku University, Sendai 981-8555, Japan.
Kyosuke YoshimiCenter for Interdisciplinary Research, Tohoku University, Sendai 980-8578, Japan; Graduate School of Environmental Studies, Tohoku University, Sendai 980-8578, Japan.
Tomohisa OgawaThe Department of Biomolecular Sciences, Graduate School of Life Sciences, Tohoku University, Sendai 980-8577, Japan; Center for Interdisciplinary Research, Tohoku University, Sendai 980-8578, Japan.
Tohoku University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Nacreous layers of pearl oyster are one of the major functional biominerals. By participating in organic compound-crystal interactions, they assemble into consecutive mineral lamellae-like photonic crystals. Their biomineralization mechanisms are controlled by macromolecules; however, they are largely unknown. Here, we report two novel lectins termed PPL2A and PPL2B, which were isolated from the mantle and the secreted fluid of Pteria penguin oyster. PPL2A is a hetero-dimer composed of α and γ subunits, and PPL2B is a homo-dimer of β subunit, all of which surprisingly shared sequence homology with the jacalin-related plant lectin. On the basis of knockdown experiments at the larval stage, the identification of PPLs in the shell matrix, and in vitro CaCO3 crystallization analysis, we conclude that two novel jacalin-related lectins participate in the biomineralization of P. penguin nacre as matrix proteins. Furthermore, it was found that trehalose, which is specific recognizing carbohydrates for PPL2A and is abundant in the secreted fluid of P. penguin mantle, functions as a regulatory factor for biomineralization via PPL2A. These observations highlight the unique functions, diversity and molecular evolution of this lectin family involved in the mollusk shell formation.

Indexed as

AnimalsAnimal ShellsCrystallography, X-RayExtracellular Matrix ProteinsLectinsPinctadaProtein Structure, TertiaryStructural Homology, ProteinExtracellular Matrix ProteinsLectins

Identifiers

PMID25375177
PMCPMC4223035
OpenAlexW2042755541

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.