Evidence map›Paper›PMID 25372880›Full record

ArticleJournal of proteome research2014

Cellular responses associated with ROS production and cell fate decision in early stress response to iron limitation in the diatom Thalassiosira pseudonana.

Chun-Shan Luo, Jun-Rong Liang, Qun Lin, Caixia Li, Chris Bowler, Donald M Anderson, Peng Wang, Xin-Wei Wang, Ya-Hui Gao

Abstract read
In one paragraph

Article in Journal of proteome research, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
3.1field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 44 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 3 countries.

Chun-Shan LuoSchool of Life Sciences, Xiamen University , Xiamen 361102, People's Republic of China.
Jun-Rong Liang
Qun Lin
Caixia Li
Chris Bowler
Donald M Anderson
Peng Wang
Xin-Wei Wang
Ya-Hui Gao
Xiamen University · CNInstitut de Biologie de l'École Normale Supérieure · FRWoods Hole Oceanographic Institution · US

Funding

WHCOHH: Harmful algal bloom dynamics and epigenetic mechanism of toxin actionP01ES021923 · NIEHS · WOODS HOLE OCEANOGRAPHIC INSTITUTION · PI STEGEMAN, JOHN J · 2012 to 2016
$2.1M
NIEHS NIH HHS 1-P01-ES021923-01NIEHS NIH HHS P01 ES021923
6 · The paper itself

Abstract

Investigation of how diatoms cope with the rapid fluctuations in iron bioavailability in marine environments may facilitate a better understanding of the mechanisms underlying their ecological success, in particular their ability to proliferate rapidly during favorable conditions. In this study, using in vivo biochemical markers and whole-cell iTRAQ-based proteomics analysis, we explored the cellular responses associated with reactive oxygen species (ROS) production and cell fate decision during the early response to Fe limitation in the centric diatom Thalassiosira pseudonana. Fe limitation caused a significant decrease in Photosystem (PS) II photosynthetic efficiency, damage to the photosynthetic electron transport chain in PS I, and blockage of the respiratory chain in complexes III and IV, which could all result in excess ROS accumulation. The increase in ROS likely triggered programmed cell death (PCD) in some of the Fe-limited cells through synthesis of a series of proteins involved in the delicate balance between pro-survival and pro-PCD factors. The results provide molecular-level insights into the major strategies that may be employed by T. pseudonana in response to Fe-limitation: the reduction of cell population density through PCD to reduce competition for available Fe, the reallocation of intracellular nitrogen and Fe to ensure survival, and an increase in expression of antioxidant and anti-PCD proteins to cope with stress.

Indexed as

Adaptation, PhysiologicalAntioxidantsApoptosisChromatography, LiquidDiatomsElectron Transport Complex IIIElectron Transport Complex IVGene ExpressionIronMass SpectrometryMicroscopy, Electron, TransmissionPhotosynthesisPhotosystem II Protein ComplexProteomeProteomicsReactive Oxygen SpeciesAntioxidantsElectron Transport Complex IIIElectron Transport Complex IVIronPhotosystem II Protein ComplexProteomeReactive Oxygen SpeciesdiatomFe-limitation stressiTRAQ-based proteomicsphytoplanktonprogrammed cell death (PCD)reactive oxygen species (ROS)

Identifiers

PMID25372880
PMCPMC4261981
OpenAlexW2328226947

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.