Evidence map›Paper›PMID 25372814›Full record

ArticleActa crystallographica. Section F, Structural biology communications2014

Structure of type II dehydroquinase from Pseudomonas aeruginosa.

Scott Reiling, Alan Kelleher, Monica M Matsumoto, Gonteria Robinson, Oluwatoyin A Asojo

Abstract read
In one paragraph

Article in Acta crystallographica. Section F, Structural biology communications, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Molecules (Basel, Switzerland) · 2020
    Review
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Scott ReilingToxicology Department, School of Public Health University, University of Nebraska Medical Center, Omaha, NE 68198, USA.
Alan KelleherNational School of Tropical Medicine, Baylor College of Medicine, Houston, TX 77030, USA.
Monica M MatsumotoNational School of Tropical Medicine, Baylor College of Medicine, Houston, TX 77030, USA.
Gonteria RobinsonNational School of Tropical Medicine, Baylor College of Medicine, Houston, TX 77030, USA.
Oluwatoyin A AsojoNational School of Tropical Medicine, Baylor College of Medicine, Houston, TX 77030, USA.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Pseudomonas aeruginosa causes opportunistic infections and is resistant to most antibiotics. Ongoing efforts to generate much-needed new antibiotics include targeting enzymes that are vital for P. aeruginosa but are absent in mammals. One such enzyme, type II dehydroquinase (DHQase), catalyzes the interconversion of 3-dehydroquinate and 3-dehydroshikimate, a necessary step in the shikimate pathway. This step is vital for the proper synthesis of phenylalanine, tryptophan, tyrosine and other aromatic metabolites. The recombinant expression, purification and crystal structure of catalytically active DHQase from P. aeruginosa (PaDHQase) are presented. Cubic crystals belonging to space group F23, with unit-cell parameters a=b=c=125.39 Å, were obtained by vapor diffusion in sitting drops and the structure was refined to an R factor of 16% at 1.74 Å resolution. PaDHQase is a prototypical type II DHQase with the classical flavodoxin-like α/β topology.

Indexed as

Amino Acid SequenceBacterial ProteinsCrystallography, X-RayHydro-LyasesMolecular Sequence DataProtein Structure, SecondaryPseudomonas aeruginosa3-dehydroquinate dehydrataseBacterial ProteinsHydro-LyasesPseudomonas aeruginosashikimate pathwaytype II dehydroquinase

Identifiers

PMID25372814
PMCPMC4231849

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.