Evidence map›Paper›PMID 25372610›Full record

ArticlePloS one2014

Positive selection of deleterious alleles through interaction with a sex-ratio suppressor gene in African Buffalo: a plausible new mechanism for a high frequency anomaly.

Pim van Hooft, Ben J Greyling, Wayne M Getz, Paul D van Helden, Bas J Zwaan, Armanda D S Bastos

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.2field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 5 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 3 countries.

Pim van HooftResource Ecology Group, Wageningen University, Wageningen, The Netherlands; Mammal Research Institute, Department of Zoology & Entomology, University of Pretoria, Hatfield, South Africa.
Ben J GreylingMammal Research Institute, Department of Zoology & Entomology, University of Pretoria, Hatfield, South Africa; Agricultural Research Council, Irene, South Africa.
Wayne M GetzDepartment of Environmental Science Policy & Management, University of California, Berkeley, California, United States of America; School of Mathematical Sciences, University of KwaZulu-Natal, Durban, South Africa.
Paul D van HeldenDST/NRF Centre of Excellence for Biomedical TB Research, US/MRC Centre for TB Research, Division of Molecular Biology and Human Genetics, Faculty of Health Sciences, Stellenbosch University, Tygerberg, South Africa.
Bas J ZwaanLaboratory of Genetics, Wageningen University, Droevendaalsesteeg 1, Wageningen, The Netherlands.
Armanda D S BastosMammal Research Institute, Department of Zoology & Entomology, University of Pretoria, Hatfield, South Africa.
University of Pretoria · ZAWageningen University & Research · NLStellenbosch University · ZAUniversity of KwaZulu-Natal · ZA

Funding

The ecology of environmentally maintained episodic anthrax in Esotha, NamibiaR01GM083863 · NIGMS · UNIVERSITY OF CALIFORNIA BERKELEY · PI GETZ, WAYNE M · 2008 to 2011
$1.7M
NIGMS NIH HHS GM83863NIGMS NIH HHS R01 GM083863
6 · The paper itself

Abstract

Although generally rare, deleterious alleles can become common through genetic drift, hitchhiking or reductions in selective constraints. Here we present a possible new mechanism that explains the attainment of high frequencies of deleterious alleles in the African buffalo (Syncerus caffer) population of Kruger National Park, through positive selection of these alleles that is ultimately driven by a sex-ratio suppressor. We have previously shown that one in four Kruger buffalo has a Y-chromosome profile that, despite being associated with low body condition, appears to impart a relative reproductive advantage, and which is stably maintained through a sex-ratio suppressor. Apparently, this sex-ratio suppressor prevents fertility reduction that generally accompanies sex-ratio distortion. We hypothesize that this body-condition-associated reproductive advantage increases the fitness of alleles that negatively affect male body condition, causing genome-wide positive selection of these alleles. To investigate this we genotyped 459 buffalo using 17 autosomal microsatellites. By correlating heterozygosity with body condition (heterozygosity-fitness correlations), we found that most microsatellites were associated with one of two gene types: one with elevated frequencies of deleterious alleles that have a negative effect on body condition, irrespective of sex; the other with elevated frequencies of sexually antagonistic alleles that are negative for male body condition but positive for female body condition. Positive selection and a direct association with a Y-chromosomal sex-ratio suppressor are indicated, respectively, by allele clines and by relatively high numbers of homozygous deleterious alleles among sex-ratio suppressor carriers. This study, which employs novel statistical techniques to analyse heterozygosity-fitness correlations, is the first to demonstrate the abundance of sexually-antagonistic genes in a natural mammal population. It also has important implications for our understanding not only of the evolutionary and ecological dynamics of sex-ratio distorters and suppressors, but also of the functioning of deleterious and sexually-antagonistic alleles, and their impact on population viability.

Indexed as

AllelesGenes, SuppressorSelection, GeneticSex RatioAnimalsBuffaloesChromosomesFemaleGene FrequencyGenotypeHeterozygoteMaleMicrosatellite RepeatsQuantitative Trait, HeritableY Chromosome

Identifiers

PMID25372610
PMCPMC4221135
OpenAlexW2154084798

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.