Evidence map›Paper›PMID 25371233›Full record

ArticleBMC research notes2014

A novel pathogenic mutation of the CYP27B1 gene in a patient with vitamin D-dependent rickets type 1: a case report.

Amir M I Babiker, Iman Al Gadi, Nasir A M Al-Jurayyan, Abdulrahman M H Al Nemri, Ali Abdu N Al Haboob, Ahmed Amer Al Boukai, Ali Al Zahrani, Hanan Ahmed Habib

Open access · goldAbstract readCase Reports
In one paragraph

Article in BMC research notes, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.7field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 26 citations in OpenAlex.

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  4. A Novel Compound Nonsense Variant inDiseases (Basel, Switzerland) · 2024
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  11. Genetic and Clinical Characteristics of Patients with Vitamin D Dependent Rickets Type 1AJournal of clinical research in pediatric endocrinology · 2019
    Article
  12. A Case of Vitamin D-Dependent Rickets Type 1A with a Novel Mutation in the Uzbek Population.Journal of clinical research in pediatric endocrinology · 2016
    Article
  13. Long-term clinical outcome and the identification of homozygousAnnals of pediatric endocrinology & metabolism · 2016
    Article
  14. Article
  15. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Amir M I BabikerPediatric Department, College of Medicine and King Khalid University Hospital, Riyadh, Saudi Arabia. babikeramir@hotmail.com.
Iman Al Gadi
Nasir A M Al-Jurayyan
Abdulrahman M H Al Nemri
Ali Abdu N Al Haboob
Ahmed Amer Al Boukai
Ali Al Zahrani
Hanan Ahmed Habib
King Khalid University Hospital · SAKing Khalid University · SAKing Saud University · SA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundRickets can occur due to Vitamin D deficiency or defects in its metabolism. Three rare genetic types of rickets with different alterations of genes have been reported, including: Vitamin D dependent rickets type 1, Vitamin D dependent rickets type 2 or also known as Vitamin D resistant rickets and 25 hydroxylase deficiency rickets. Vitamin D dependent rickets type 1 is inherited in an autosomal recessive pattern, and is caused by mutations in the CYP27B1 gene encoding the 1α-hydroxylase enzyme. We report here a new mutation in CYP27B1, which lead to Vitamin D dependent rickets type 1. CASE PRESENTATION: We report on a 13-month-old Arabic Saudi girl with Vitamin D dependent rickets type 1 presented with multiple fractures and classic features of rickets. A whole exome sequencing identified a novel pathogenic missense mutation (CYP27B1:Homozygous c.1510C > T(p.Q504X)) which results in a protein truncating alteration. Both parents are heterozygous carriers of the mutation. Based on data search in Human Gene Mutation Database, 63 CYP27B1 alterations were reported: only 28.6% are protein truncating (5 nonsense, 13 frameshift insertions/deletions, 0 gross deletions), while 61.9% are non-truncating (38 missense, 1 small in-frame insertions/deletion), and 9.5% are possible protein-truncating (5 splice, 1 regulatory).

conclusionThe deleterious effect of this alteration, which was the only mutation detected in the CYP27B1 common gene of Vitamin D dependent rickets type 1 in the proband, and its autosomal recessive inheritance fashion, both support a pathogenic nature of this mutation as the cause of Vitamin D dependent rickets type 1.

Indexed as

Mutation, Missense25-Hydroxyvitamin D3 1-alpha-HydroxylaseArabsCalciumDatabases, GeneticDietary SupplementsDNA Mutational AnalysisFamilial Hypophosphatemic RicketsFemaleGenetic Predisposition to DiseaseHeredityHomozygoteHumansInfantPedigreePhenotype25-Hydroxyvitamin D3 1-alpha-HydroxylaseCalciumVitamin D

Identifiers

PMID25371233
PMCPMC4232664
OpenAlexW2070171449

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.