Evidence map›Paper›PMID 25368190›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2014

Metabolic sensor governing bacterial virulence in Staphylococcus aureus.

Yue Ding, Xing Liu, Feifei Chen, Hongxia Di, Bin Xu, Lu Zhou, Xin Deng, Min Wu, Cai-Guang Yang, Lefu Lan

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 61 papers.

0numbers the graph read from it
0cells of the map it votes in
61citing papers in PubMed
4.1field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

61 citing papers in PubMed, 103 citations in OpenAlex.

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  6. Linking Virulence and Iron Limitation Response inJournal of proteome research · 2025
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  18. First Record of the Rare SpeciesPathogens (Basel, Switzerland) · 2022
    Article
  19. Article
  20. Article

1 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Yue DingDepartment of Molecular Pharmacology and.
Xing LiuChinese Academy of Sciences Key Laboratory of Receptor Research, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, Shanghai 201203, China;
Feifei ChenDepartment of Molecular Pharmacology and.
Hongxia DiDepartment of Molecular Pharmacology and.
Bin XuDepartment of Molecular Pharmacology and.
Lu ZhouDepartment of Medicinal Chemistry, School of Pharmacy, Fudan University, Shanghai 201203, China;
Xin DengDepartment of Chemistry and Institute for Biophysical Dynamics, The University of Chicago, Chicago, IL 60637; and.
Min WuDepartment of Basic Sciences University of North Dakota School of Medicine and Health Sciences, Grand Forks, ND 58203.
Cai-Guang YangChinese Academy of Sciences Key Laboratory of Receptor Research, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, Shanghai 201203, China; yangcg@simm.ac.cn llan@mail.shcnc.ac.cn.
Lefu LanDepartment of Molecular Pharmacology and yangcg@simm.ac.cn llan@mail.shcnc.ac.cn.
Shanghai Institute of Materia Medica · CNFudan University · CNUniversity of Chicago · USUniversity of North Dakota · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

An effective metabolism is essential to all living organisms, including the important human pathogen Staphylococcus aureus. To establish successful infection, S. aureus must scavenge nutrients and coordinate its metabolism for proliferation. Meanwhile, it also must produce an array of virulence factors to interfere with host defenses. However, the ways in which S. aureus ties its metabolic state to its virulence regulation remain largely unknown. Here we show that citrate, the first intermediate of the tricarboxylic acid (TCA) cycle, binds to and activates the catabolite control protein E (CcpE) of S. aureus. Using structural and site-directed mutagenesis studies, we demonstrate that two arginine residues (Arg145 and Arg256) within the putative inducer-binding cavity of CcpE are important for its allosteric activation by citrate. Microarray analysis reveals that CcpE tunes the expression of 126 genes that comprise about 4.7% of the S. aureus genome. Intriguingly, although CcpE is a major positive regulator of the TCA-cycle activity, its regulon consists predominantly of genes involved in the pathogenesis of S. aureus. Moreover, inactivation of CcpE results in increased staphyloxanthin production, improved ability to acquire iron, increased resistance to whole-blood-mediated killing, and enhanced bacterial virulence in a mouse model of systemic infection. This study reveals CcpE as an important metabolic sensor that allows S. aureus to sense and adjust its metabolic state and subsequently to coordinate the expression of virulence factors and bacterial virulence.

Indexed as

AbscessAconitate HydrataseAllosteric RegulationAnimalsArginineBacterial ProteinsBinding SitesCitric AcidCrystallography, X-RayDNA, BacterialGene Expression Regulation, BacterialIronMiceModels, MolecularMutagenesis, Site-DirectedPigmentationAconitate HydrataseArginineBacterial Proteinscatabolite control proteins, bacteriaCitric AcidDNA, BacterialIronRepressor Proteinsbacterial virulenceiron acquisitionmetabolismStaphylococcus aureusvirulence gene expression

Identifiers

PMID25368190
PMCPMC4246259
OpenAlexW2102177890

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.