Evidence map›Paper›PMID 25367844›Full record

ArticleMagnetic resonance in medicine2015

Classification of sodium MRI data of cartilage using machine learning.

Guillaume Madelin, Frederick Poidevin, Antonios Makrymallis, Ravinder R Regatte

Abstract read
In one paragraph

Article in Magnetic resonance in medicine, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Article
  2. Article
  3. Review of Quantitative Knee Articular Cartilage MR Imaging.Magnetic resonance in medical sciences : MRMS : an official journal of Japan Society of Magnetic Resonance in Medicine · 2022
    Article
  4. Article
  5. Article
  6. Review
  7. Intervertebral Disc Degeneration Is Associated With Aberrant Endplate Remodeling and Reduced Small Molecule Transport.Journal of bone and mineral research : the official journal of the American Society for Bone and Mineral Research · 2020
    Article
  8. Review
  9. Article
  10. Review
  11. Machine Learning in Orthopedics: A Literature Review.Frontiers in bioengineering and biotechnology · 2018
    Review
  12. New Techniques in MR Imaging of the Ankle and Foot.Magnetic resonance imaging clinics of North America · 2017
    Review
  13. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Guillaume MadelinDepartment of Radiology, Center for Biomedical Imaging, New York University School of Medicine, New York, New York, USA.
Frederick PoidevinDepartamento de Astrofísica, Instituto de Astrofísica de Canarias, La Laguna, Tenerife, Spain; Universidad de La Laguna, La Laguna, Tenerife, Spain.
Antonios MakrymallisDepartment of Physics & Astronomy, University College London, Kathleen Lonsdale Building, Gower Place, London, UK.
Ravinder R RegatteDepartment of Radiology, Center for Biomedical Imaging, New York University School of Medicine, New York, New York, USA.

Funding

PSYCHOSOCIAL COREP30AG008051 · NIA · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI SHAO, YONGZHAO · 1990 to 2019
$36.1M
Sodium MRI for Assessment of Early OA.R01AR060238 · NIAMS · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI REGATTE, RAVINDER · 2011 to 2015
$2.9M
Cartilage, Bone and Marrow Interactions in Knee OAR01AR056260 · NIAMS · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI REGATTE, RAVINDER · 2010 to 2014
$2.5M
Quantitative MRI for Early Diagnosis of ArthritisR01AR053133 · NIAMS · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI REGATTE, RAVINDER · 2007 to 2011
$1.8M
Sodium MRI of the HipR03AR065763 · NIAMS · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI MADELIN, GUILLAUME · 2014 to 2015
$170k
NIAMS NIH HHS 1R01AR053133NIAMS NIH HHS 1R01AR056260NIAMS NIH HHS 1R01AR060238NIAMS NIH HHS 1R03AR065763NIAMS NIH HHS R01 AR053133NIAMS NIH HHS R01 AR056260NIAMS NIH HHS R01 AR060238NIAMS NIH HHS R03 AR065763NIA NIH HHS P30 AG008051
6 · The paper itself

Abstract

purposeTo assess the possible utility of machine learning for classifying subjects with and subjects without osteoarthritis using sodium magnetic resonance imaging data. Theory: Support vector machine, k-nearest neighbors, naïve Bayes, discriminant analysis, linear regression, logistic regression, neural networks, decision tree, and tree bagging were tested.

methodsSodium magnetic resonance imaging with and without fluid suppression by inversion recovery was acquired on the knee cartilage of 19 controls and 28 osteoarthritis patients. Sodium concentrations were measured in regions of interests in the knee for both acquisitions. Mean (MEAN) and standard deviation (STD) of these concentrations were measured in each regions of interest, and the minimum, maximum, and mean of these two measurements were calculated over all regions of interests for each subject. The resulting 12 variables per subject were used as predictors for classification.

resultsEither Min [STD] alone, or in combination with Mean [MEAN] or Min [MEAN], all from fluid suppressed data, were the best predictors with an accuracy >74%, mainly with linear logistic regression and linear support vector machine. Other good classifiers include discriminant analysis, linear regression, and naïve Bayes.

conclusionMachine learning is a promising technique for classifying osteoarthritis patients and controls from sodium magnetic resonance imaging data.

Indexed as

Machine LearningAlgorithmsCartilage, ArticularHumansKneeMagnetic Resonance ImagingOsteoarthritisSodiumSodiumcartilageclassificationmachine leaningosteoarthritissodium MRI

Identifiers

PMID25367844
PMCPMC4417663

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.