Evidence map›Paper›PMID 25367630›Full record

ArticleScientific reports2014

ABCB4 is frequently epigenetically silenced in human cancers and inhibits tumor growth.

Steffen Kiehl, Stefanie C Herkt, Antje M Richter, Liesa Fuhrmann, Nefertiti El-Nikhely, Werner Seeger, Rajkumar Savai, Reinhard H Dammann

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 28 citations in OpenAlex.

  1. Article
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  4. Structure of the human lipid exporter ABCB4 in a lipid environment.Nature structural & molecular biology · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Steffen KiehlInstitute for Genetics; Justus-Liebig-University; Universities of Giessen and Marburg Lung Center, Member of the German Center for Lung Research; 35392 Giessen, Germany.
Stefanie C HerktInstitute for Genetics; Justus-Liebig-University; Universities of Giessen and Marburg Lung Center, Member of the German Center for Lung Research; 35392 Giessen, Germany.
Antje M RichterInstitute for Genetics; Justus-Liebig-University; Universities of Giessen and Marburg Lung Center, Member of the German Center for Lung Research; 35392 Giessen, Germany.
Liesa FuhrmannMolecular Mechanisms in Lung Cancer, Max Planck Institute for Heart and Lung Research, Member of the German Center for Lung Research; 61231 Bad Nauheim, Germany.
Nefertiti El-NikhelyMolecular Mechanisms in Lung Cancer, Max Planck Institute for Heart and Lung Research, Member of the German Center for Lung Research; 61231 Bad Nauheim, Germany.
Werner SeegerMolecular Mechanisms in Lung Cancer, Max Planck Institute for Heart and Lung Research, Member of the German Center for Lung Research; 61231 Bad Nauheim, Germany.
Rajkumar SavaiMolecular Mechanisms in Lung Cancer, Max Planck Institute for Heart and Lung Research, Member of the German Center for Lung Research; 61231 Bad Nauheim, Germany.
Reinhard H DammannInstitute for Genetics; Justus-Liebig-University; Universities of Giessen and Marburg Lung Center, Member of the German Center for Lung Research; 35392 Giessen, Germany.
Institute of Genetics · HUMax Planck Institute for Heart and Lung Research · DEGerman Center for Lung Research · DEJustus-Liebig-Universität Gießen · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Epigenetic silencing through promoter hypermethylation is an important hallmark for the inactivation of tumor-related genes in carcinogenesis. Here we identified the ATP-binding cassette sub-family B member 4 (ABCB4) as a novel epigenetically silenced target gene. We investigated the epigenetic regulation of ABCB4 in 26 human lung, breast, skin, liver, head and neck cancer cells lines and in primary cancers by methylation and expression analysis. Hypermethylation of the ABCB4 CpG island promoter occurred in 16 out of 26 (62%) human cancer cell lines. Aberrant methylation of ABCB4 was also revealed in 39% of primary lung cancer and in 20% of head and neck cancer tissues. In 37% of primary lung cancer samples, ABCB4 expression was absent. For breast cancer a significant hypermethylation occurred in tumor tissues (41%) compared to matching normal samples (0%, p = 0.002). Silencing of ABCB4 was reversed by 5-aza-2'-deoxycytidine and zebularine treatments leading to its reexpression in cancer cells. Overexpression of ABCB4 significantly suppressed colony formation and proliferation of lung cancer cells. Hypermethylation of Abcb4 occurred also in murine cancer, but was not found in normal tissues. Our findings suggest that ABCB4 is a frequently silenced gene in different cancers and it may act tumor suppressivly in lung cancer.

Indexed as

Epigenesis, GeneticGene Expression Regulation, NeoplasticAnimalsATP Binding Cassette Transporter, Subfamily BCell ProliferationCpG IslandsDNA MethylationHEK293 CellsHeLa CellsHumansLung NeoplasmsMiceMice, Inbred C57BLATP Binding Cassette Transporter, Subfamily Bmultidrug resistance protein 3

Identifiers

PMID25367630
PMCPMC4219162
OpenAlexW2100995857

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.