Evidence map›Paper›PMID 25367283›Full record

ArticleMolecular genetics and genomics : MGG2015

The rice (Oryza sativa L.) LESION MIMIC RESEMBLING, which encodes an AAA-type ATPase, is implicated in defense response.

Rym Fekih, Muluneh Tamiru, Hiroyuki Kanzaki, Akira Abe, Kentaro Yoshida, Eiko Kanzaki, Hiromasa Saitoh, Hiroki Takagi, Satoshi Natsume, Jerwin R Undan and 2 more

Abstract read
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In one paragraph

Article in Molecular genetics and genomics : MGG, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
3.7field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 67 citations in OpenAlex.

  1. Article
  2. Review
  3. All Roads Lead to Rome: Pathways to Engineering Disease Resistance in Plants.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2025
    Review
  4. Article
  5. Marker-Assisted Selection of Jacalin-Related Lectin GenesInternational journal of molecular sciences · 2024
    Article
  6. Article
  7. Article
  8. High-Density Linkage Maps from Japanese RicePlants (Basel, Switzerland) · 2023
    Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Article
  16. Review
  17. Disruption ofInternational journal of molecular sciences · 2022
    Article
  18. Article
  19. A Phosphoproteomics Study of the SoybeanFrontiers in plant science · 2022
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 1 institution in 1 country.

Rym FekihIwate Biotechnology Research Center, Narita 22-174-4, Kitakami, Iwate, 024-0003, Japan.
Muluneh Tamiru
Hiroyuki Kanzaki
Akira Abe
Kentaro Yoshida
Eiko Kanzaki
Hiromasa Saitoh
Hiroki Takagi
Satoshi Natsume
Jerwin R Undan
Jesusa Undan
Ryohei Terauchi
Iwate Biotechnology Research Center · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Lesion mimic mutants (LMMs) provide a useful tool to study defense-related programmed cell death (PCD) in plants. Although a number of LMMs have been identified in multiple species, most of the candidate genes are yet to be isolated. Here, we report the identification and characterization of a novel rice (Oryza sativa L.) lesion mimic resembling (lmr) mutant, and cloning of the corresponding LMR gene. The LMR locus was initially delineated to 1.2 Mb region on chromosome 6, which was further narrowed down to 155-kb using insertions/deletions (INDELs) and cleavage amplified polymorphic sequence markers developed in this study. We sequenced the open reading frames predicted within the candidate genomic region, and identified a G-A base substitution causing a premature translation termination in a gene that encodes an ATPase associated with various cellular activities type (AAA-type) protein. RNA interference transgenic lines with reduced LMR transcripts exhibited the lesion mimic phenotype similar to that of lmr plants. Furthermore, expression of the wild-type LMR in the mutant background complemented the lesion phenotype, confirming that the mutation identified in LMR is responsible for the mutant phenotype. The pathogenesis-related (PR) genes PBZ1 and PR1 were induced in lmr, which also showed enhanced resistance to rice blast (Magnaporthe oryzae) and bacterial blight (Xanthomonas oryzae pv. oryzae), suggesting LMR is a negative regulator of cell death in rice. The identification of lmr and cloning of the corresponding LMR gene provide an additional resource for the study of PCD in plants.

Indexed as

Adenosine TriphosphatasesAmino Acid SequenceChloroplastsCloning, MolecularDisease ResistanceGenetic Association StudiesGenetic LinkageMolecular Sequence DataOryzaPhenotypePhylogenyPlant LeavesPlant ProteinsProtein TransportSequence Analysis, DNAAdenosine TriphosphatasesPlant Proteins

Identifiers

PMID25367283
OpenAlexW2092647168

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.