Evidence map›Paper›PMID 25366262›Full record

ArticleBMC medical genetics2014

Left ventricular diastolic function associated with common genetic variation in ATP12A in a general population.

Judita Knez, Erika Salvi, Valérie Tikhonoff, Katarzyna Stolarz-Skrzypek, Andrew Ryabikov, Lutgarde Thijs, Daniele Braga, Malgorzata Kloch-Badelek, Sofia Malyutina, Edoardo Casiglia and 6 more

Open access · goldAbstract read
In one paragraph

Article in BMC medical genetics, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.1field-weighted citation impact, top 47% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 6 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 8 institutions in 5 countries.

Judita KnezKU Leuven Department of Cardiovascular Sciences, Research Unit Hypertension and Cardiovascular Epidemiology, University of Leuven, Leuven, Belgium. Judita.Knez@med.kuleuven.be.
Erika SalviDepartment of Health, University of Milano and Genomics and Bioinformatics Platform, Fondazione Filarete, Milano, Italy. erika.salvi@unimi.it.
Valérie TikhonoffDepartment of Medicine, University of Padova, Padova, Italy. v.tikhonoff@ucl.ac.uk.
Katarzyna Stolarz-SkrzypekFirst Department of Cardiology, Interventional Electrocardiology and Hypertension, Jagiellonian University Medical College, Krakow, Poland. katarzyna_stolarz@poczta.onet.pl.
Andrew RyabikovInstitute of Internal and Preventive Medicine, Novosibirsk, Russian Federation. a_ryabikov@hotmail.com.
Lutgarde ThijsKU Leuven Department of Cardiovascular Sciences, Research Unit Hypertension and Cardiovascular Epidemiology, University of Leuven, Leuven, Belgium. Lutgarde.Thijs@med.kuleuven.be.
Daniele BragaDepartment of Health, University of Milano and Genomics and Bioinformatics Platform, Fondazione Filarete, Milano, Italy. daniele.braga@hotmail.it.
Malgorzata Kloch-BadelekFirst Department of Cardiology, Interventional Electrocardiology and Hypertension, Jagiellonian University Medical College, Krakow, Poland. malgorzata.kloch-badelek@uj.edu.pl.
Sofia MalyutinaInstitute of Internal and Preventive Medicine, Novosibirsk, Russian Federation. smalyutina@hotmail.com.
Edoardo CasigliaDepartment of Medicine, University of Padova, Padova, Italy. edoardo.casiglia@unipd.it.
Danuta CzarneckaFirst Department of Cardiology, Interventional Electrocardiology and Hypertension, Jagiellonian University Medical College, Krakow, Poland. danuta.czarnecka@uj.edu.pl.
Kalina Kawecka-JaszczFirst Department of Cardiology, Interventional Electrocardiology and Hypertension, Jagiellonian University Medical College, Krakow, Poland. mckaweck@cyf-kr.edu.pl.
Daniele CusiDepartment of Health, University of Milano and Genomics and Bioinformatics Platform, Fondazione Filarete, Milano, Italy. daniele.cusi@unimi.it.
Tim NawrotDepartment of Public Health, Occupational and Environmental Medicine, KU Leuven, Leuven, Belgium. tim.nawrot@uhasselt.be.
Jan A StaessenKU Leuven Department of Cardiovascular Sciences, Research Unit Hypertension and Cardiovascular Epidemiology, University of Leuven, Leuven, Belgium. Jan.Staessen@med.kuleuven.be.
Tatiana KuznetsovaKU Leuven Department of Cardiovascular Sciences, Research Unit Hypertension and Cardiovascular Epidemiology, University of Leuven, Leuven, Belgium. tatiana.kouznetsova@med.kuleuven.be.
Jagiellonian University · PLKU Leuven · BEFondazione Filarete · ITResearch Institute of Therapy and Preventive Medicine · RUUniversity of Padua · ITHasselt University · BEMaastricht University · NLUniversity of Milan · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundLeft ventricular (LV) function depends on the activity of transmembrane electrolyte transporters. Failing human myocardium has lower Na(+)/K(+) ATPase expression and higher intracellular sodium concentrations. The ATP12A gene encodes a catalytic subunit of an ATPase that can function as a Na(+)/K(+) pump. We, therefore, investigated the association between LV function and common genetic variants in ATP12A.

methodsA random sample of 1166 participants (53.7% women; mean age 49.5 years, 44.8% hypertensive) was recruited in Belgium, Poland, Italy and Russia. We measured transmitral early and late diastolic velocities (E and A) by pulsed wave Doppler, and mitral annular velocities (e' and a') by tissue Doppler. Using principal component analysis, we summarized 7 Doppler indexes - namely, E, A, e' and a' velocities, and their ratios (E/A, e'/a', and E/e') - into a single diastolic score. We genotyped 5 tag SNPs (rs963984, rs9553395, rs10507337, rs12872010, rs2071490) in ATP12A. In our analysis we focused on rs10507337 because it is located within a transcription factor binding site.

resultsIn the population-based analyses while adjusting for covariables and accounting for family clusters and country, rs10507337 C allele carriers had significantly higher E/A (P = 0.003), e' (P = 5.8×10(-5)), e'/a' (P = 0.003) and diastolic score (P = 0.0001) compared to TT homozygotes. Our findings were confirmed in the haplotype analysis and in the family-based analyses in 74 informative offspring.

conclusionsLV diastolic function as assessed by conventional and tissue Doppler indexes including a composite diastolic score was associated with genetic variation in ATP12A. Further experimental studies are necessary to clarify the role of ATP12A in myocardial relaxation.

Indexed as

DiastolePolymorphism, Single NucleotideVentricular Function, LeftAdultAgedEchocardiography, DopplerFemaleGenetic Association StudiesGenotypeH(+)-K(+)-Exchanging ATPaseHumansMiddle AgedPrincipal Component AnalysisATP12A protein, humanH(+)-K(+)-Exchanging ATPase

Identifiers

PMID25366262
PMCPMC4411923
OpenAlexW2007932245

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.