Evidence map›Paper›PMID 25366194›Full record

ArticleScientific reports2014

In vitro molecular evolution yields an NEIBM with a potential novel IgG binding property.

Peipei Qi, Ying-Ying Ding, Ting He, Tong Yang, Qiuli Chen, Jiaojiao Feng, Jinhong Wang, Mingmei Cao, Xiangyu Li, Heng Peng and 3 more

Abstract read
In one paragraph

Article in Scientific reports, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Peipei QiDepartment of Medical Microbiology and Parasitology, School of Basic Medicine, Second Military Medical University, Shanghai 200433, China.
Ying-Ying DingDepartment of Medical Microbiology and Parasitology, School of Basic Medicine, Second Military Medical University, Shanghai 200433, China.
Ting HeDepartment of Medical Microbiology and Parasitology, School of Basic Medicine, Second Military Medical University, Shanghai 200433, China.
Tong YangFudan-Zhangjiang Bio-pharmaceutical Co., Ltd., Shanghai 201203, China.
Qiuli ChenDepartment of Medical Microbiology and Parasitology, School of Basic Medicine, Second Military Medical University, Shanghai 200433, China.
Jiaojiao FengDepartment of Medical Microbiology and Parasitology, School of Basic Medicine, Second Military Medical University, Shanghai 200433, China.
Jinhong WangDepartment of Medical Microbiology and Parasitology, School of Basic Medicine, Second Military Medical University, Shanghai 200433, China.
Mingmei CaoDepartment of Medical Microbiology and Parasitology, School of Basic Medicine, Second Military Medical University, Shanghai 200433, China.
Xiangyu LiDepartment of Medical Microbiology and Parasitology, School of Basic Medicine, Second Military Medical University, Shanghai 200433, China.
Heng PengDepartment of Medical Microbiology and Parasitology, School of Basic Medicine, Second Military Medical University, Shanghai 200433, China.
Huaimin ZhuDepartment of Medical Microbiology and Parasitology, School of Basic Medicine, Second Military Medical University, Shanghai 200433, China.
Jie CaoDepartment of Medical Microbiology and Parasitology, School of Basic Medicine, Second Military Medical University, Shanghai 200433, China.
Wei PanDepartment of Medical Microbiology and Parasitology, School of Basic Medicine, Second Military Medical University, Shanghai 200433, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Staphylococcus aureus protein A (SpA) and protein G of groups C and G streptococci (SpG) are two well-defined bacterial immunoglobulin (Ig)-binding proteins (IBPs) with high affinity for specific sites on IgG from mammalian hosts. Both SpA and SpG contain several highly-homologous IgG-binding domains, each of which possesses similar binding characteristic of the whole corresponding proteins. Whether specific combinations of these domains could generate a molecule with novel IgG-binding properties remained unknown. We constructed a combinatorial phage library displaying randomly-rearranged A, B, C, D and E domains of SpA as well as the B2 (G2) and B3 (G3) domains of SpG. In vitro molecular evolution directed by human, rabbit, bovine, or goat polyclonal IgGs and four subclasses of mouse monoclonal IgGs generated one common combination, D-C-G3. A series of assays demonstrated that D-C-G3 exhibited a potential novel IgG binding property that was obviously different from those of both parent proteins. This study provides an example of successful protein engineering through in vitro molecular evolution and useful approaches for structure and function studies of IBPs.

Indexed as

Directed Molecular EvolutionAmino Acid SequenceAntibodies, Monoclonal, Murine-DerivedBacterial ProteinsChromatography, AffinityGene ExpressionImmunoglobulin GMolecular Sequence DataPeptide LibraryProtein BindingStaphylococcal Protein AAntibodies, Monoclonal, Murine-DerivedBacterial ProteinsIgG Fc-binding protein, StreptococcusImmunoglobulin GPeptide LibraryStaphylococcal Protein A

Identifiers

PMID25366194
PMCPMC4219159

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.