Evidence map›Paper›PMID 25365995›Full record

ArticleThe Journal of cell biology2014

Clarin-1 acts as a modulator of mechanotransduction activity and presynaptic ribbon assembly.

Oluwatobi Ogun, Marisa Zallocchi

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of cell biology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
2.0field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 39 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Biomolecular condensates and disease pathogenesis.Science China. Life sciences · 2024
    Review
  5. Article
  6. Article
  7. Liquid-liquid phase separation in hair cell stereocilia development and maintenance.Computational and structural biotechnology journal · 2023
    Review
  8. Review
  9. Article
  10. Article
  11. Usher Syndrome: Genetics of a Human Ciliopathy.International journal of molecular sciences · 2021
    Review
  12. Usher Syndrome in the Inner Ear: Etiologies and Advances in Gene Therapy.International journal of molecular sciences · 2021
    Review
  13. Article
  14. Review
  15. Article
  16. Article
  17. Review
  18. Characterization of the transcriptomes ofAmerican journal of stem cells · 2020
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Oluwatobi OgunSensory Neuroscience Department, Boys Town National Research Hospital, Omaha, NE 68131.
Marisa ZallocchiSensory Neuroscience Department, Boys Town National Research Hospital, Omaha, NE 68131 marisa.zallocchi@boystown.org.
Boys Town National Research Hospital · US

Funding

TRANSGENIC EXPRESSION ANALYSIS OF MIRNA-144P20RR018788 · NCRR · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI WESTON, MICHAEL D · 2003 to 2011
$16.5M
UNMC Histology/Imaging and Creighton University Imaging Core FacilityP30GM110768 · NIGMS · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI SMITH, SHELLEY D · 2014 to 2018
$5.1M
The Molecular Biology of Neurosurgery SystemsP20GM103471 · NIGMS · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI SMITH, SHELLEY D · 2012 to 2013
$4.1M
NCRR NIH HHS 5P20RR018788NCRR NIH HHS P20 RR018788NIGMS NIH HHS P20 GM103471NIGMS NIH HHS P30 GM110768
6 · The paper itself

Abstract

Clarin-1 is a four-transmembrane protein expressed by hair cells and photoreceptors. Mutations in its corresponding gene are associated with Usher syndrome type 3, characterized by late-onset and progressive hearing and vision loss in humans. Mice carrying mutations in the clarin-1 gene have hair bundle dysmorphology and a delay in synapse maturation. In this paper, we examined the expression and function of clarin-1 in zebrafish hair cells. We observed protein expression as early as 1 d postfertilization. Knockdown of clarin-1 resulted in inhibition of FM1-43 incorporation, shortening of the kinocilia, and mislocalization of ribeye b clusters. These phenotypes were fully prevented by co-injection with clarin-1 transcript, requiring its C-terminal tail. We also observed an in vivo interaction between clarin-1 and Pcdh15a. Altogether, our results suggest that clarin-1 is functionally important for mechanotransduction channel activity and for proper localization of synaptic components, establishing a critical role for clarin-1 at the apical and basal poles of hair cells.

Indexed as

Mechanotransduction, CellularAnimalsCadherin Related ProteinsCadherinsCiliaEndocytosisHair Cells, AuditoryHeLa CellsHumansMembrane ProteinsPresynaptic TerminalsProtein TransportSecretory VesiclesUsher SyndromesZebrafishZebrafish ProteinsCadherin Related ProteinsCadherinsCDHR15 protein, zebrafishCLRN1 protein, zebrafishMembrane ProteinsZebrafish Proteins

Identifiers

PMID25365995
PMCPMC4226736
OpenAlexW2054052634

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.