Evidence map›Paper›PMID 25365311›Full record

ArticleThe Journal of clinical endocrinology and metabolism2015

Establishment and characterization of novel human primary and metastatic anaplastic thyroid cancer cell lines and their genomic evolution over a year as a primagraft.

Manoj Garg, Ryoko Okamoto, Yasunobu Nagata, Deepika Kanojia, Subhashree Venkatesan, Anand M T, Glenn D Braunstein, Jonathan W Said, Ngan B Doan, Quoc Ho and 8 more

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of clinical endocrinology and metabolism, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 27 citations in OpenAlex.

  1. Article
  2. Review
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  6. Review
  7. The multifaceted role of reactive oxygen species in tumorigenesis.Cellular and molecular life sciences : CMLS · 2020
    Review
  8. Article
  9. Review
  10. Immunotherapy in anaplastic thyroid cancer.American journal of translational research · 2020
    Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Article
  16. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 5 institutions in 3 countries.

Manoj GargCancer Science Institute (CSI) of Singapore (M.G., D.K., S.V., A.M.T., L.-z.L., K.T.T., W.J.C., H.Y., H.P.K.), National University of Singapore, Singapore 117599, Singapore; Division of Hematology/Oncology (R.O., Q.H., T.A., S.G., H.P.K.), Cedars-Sinai Medical Center, Los Angeles, California 90048; Graduate School of Medicine (Y.N., S.O.), The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-8655, Japan; Department of Medicine (G.D.B.), Cedars-Sinai Medical Center, Los Angeles, California 90048; Department of Pathology and Laboratory Medicine (J.W.S., N.B.D.), David Geffen School of Medicine, Los Angeles, California 90048; and National University Cancer Institute (H.P.K.), National University Hospital, Singapore 117599.
Ryoko Okamoto
Yasunobu Nagata
Deepika Kanojia
Subhashree Venkatesan
Anand M T
Glenn D Braunstein
Jonathan W Said
Ngan B Doan
Quoc Ho
Tadayuki Akagi
Sigal Gery
Li-Zhen Liu
Kar Tong Tan
Wee Joo Chng
Henry Yang
Seishi Ogawa
H Phillip Koeffler
Cedars-Sinai Medical Center · USNational University Cancer Institute, Singapore · SGNational University of Singapore · SGThe University of Tokyo · JPUniversity of California, Los Angeles · US

Funding

REGULATION OF HEMATOPOIETIC CYTOKINESR01CA026038 · NCI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI KOEFFLER, HAROLD PHILLIP · 1985 to 2013
$4.7M
NCI NIH HHS 2R01CA026038-35NCI NIH HHS R01 CA026038
6 · The paper itself

Abstract

contextAnaplastic thyroid cancer (ATC) has no effective treatment, resulting in a high rate of mortality. We established cell lines from a primary ATC and its lymph node metastasis, and investigated the molecular factors and genomic changes associated with tumor growth.

objectiveThe aim of the study was to understand the molecular and genomic changes of highly aggressive ATC and its clonal evolution to develop rational therapies.

designWe established unique cell lines from primary (OGK-P) and metastatic (OGK-M) ATC specimen, as well as primagraft from the metastatic ATC, which was serially xeno-transplanted for more than 1 year in NOD scid gamma mice were established. These cell lines and primagraft were used as tools to examine gene expression, copy number changes, and somatic mutations using RNA array, SNP Chip, and whole exome sequencing.

resultsMice carrying sc (OGK-P and OGK-M) tumors developed splenomegaly and neutrophilia with high expression of cytokines including CSF1, CSF2, CSF3, IL-1β, and IL-6. Levels of HIF-1α and its targeted genes were also elevated in these tumors. The treatment of tumor carrying mice with Bevacizumab effectively decreased tumor growth, macrophage infiltration, and peripheral WBCs. SNP chip analysis showed homozygous deletion of exons 3-22 of the PARD3 gene in the cells. Forced expression of PARD3 decreased cell proliferation, motility, and invasiveness, restores cell-cell contacts and enhanced cell adhesion. Next generation exome sequencing identified the somatic changes present in the primary, metastatic, and primagraft tumors demonstrating evolution of the mutational signature over the year of passage in vivo.

conclusionTo our knowledge, we established the first paired human primary and metastatic ATC cell lines offering unique possibilities for comparative functional investigations in vitro and in vivo. Our exome sequencing also identified novel mutations, as well as clonal evolution in both the metastasis and primagraft.

Indexed as

AgedAnimalsCell Line, TumorCell ProliferationHumansMaleMiceMice, Inbred NODNeoplasm TransplantationNeutrophilsSplenomegalyThyroid Carcinoma, AnaplasticThyroid Neoplasms

Identifiers

PMID25365311
PMCPMC4318896
OpenAlexW2140700178

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.