Evidence map›Paper›PMID 25365227›Full record

ArticleBiochemistry2014

Atomic force microscopy shows connexin26 hemichannel clustering in purified membrane fragments.

Brian Meckes, Cinzia Ambrosi, Heather Barnard, Fernando Teran Arce, Gina E Sosinsky, Ratnesh Lal

Abstract read
In one paragraph

Article in Biochemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.1field-weighted citation impact, top 44% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 3 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Brian MeckesDepartment of Bioengineering, ‡National Center for Microscopy and Imaging Research, §Department of Aerospace and Mechanical Engineering, ∥Department of Neurosciences, and ⊥Materials Science Program, University of California San Diego , 9500 Gillman Drive, La Jolla, California 92093, United States.
Cinzia Ambrosi
Heather Barnard
Fernando Teran Arce
Gina E Sosinsky
Ratnesh Lal
University of California, San Diego · US

Funding

IVEM and Image Analysis ResourceP41GM103412 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI ELLISMAN, MARK H · 2012 to 2019
$17.9M
STRUCTURE AND DYNAMICS OF CONNEXIN26 GAP JUNCTIONSR01GM065937 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI PERKINS, GUY A · 2003 to 2016
$3.9M
Amyloid ion channels to design therapeutics for neurodegenerative diseasesR01AG028709 · NIA · UNIVERSITY OF CHICAGO · PI LAL, RATNESHWAR · 2006 to 2018
$3.6M
Designing an Integrated Nanoscale System for Ion Channel Structure-Function StudyR01DA025296 · NIDA · UNIVERSITY OF CHICAGO · PI LAL, RATNESHWAR · 2008 to 2013
$1.7M
Structure, Activity & Physiological Role of HemichannelsR01DA024871 · NIDA · UNIVERSITY OF CHICAGO · PI LAL, RATNESHWAR · 2008 to 2012
$1.5M
Scanning Ion Conductance Microscope-array for the Study of Ion Channel ClustersF31DA034562 · NIDA · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI MECKES, BRIAN R · 2013 to 2015
$100k
NIA NIH HHS R01 AG028709NIDA NIH HHS F31DA034562NIDA NIH HHS R01DA024871NIDA NIH HHS R01DA025296NIGMS NIH HHS P41GM103412NIGMS NIH HHS R01GM065937
6 · The paper itself

Abstract

Connexin proteins form hexameric assemblies known as hemichannels. When docked to form gap junction (GJ) channels, hemichannels play a critical role in cell-cell communication and cellular homeostasis, but often are functional entities on their own in unapposed cell membranes. Defects in the Connexin26 (Cx26) gene are the major cause of hereditary deafness arising from dysfunctional hemichannels in the cochlea. Structural studies of Cx26 hemichannels properly trafficked and inserted in plasma membranes, including their clustering that forms a plaque-like feature in whole gap junctions, are limited. We used atomic force microscopy (AFM) to study the surface topography of Cx26 hemichannels using two different membrane preparations. Rat Cx26 containing appended carboxy terminal V5 and hexahistidine tags were expressed in baculovirus/Sf9 cell systems. The expressed Cx26 proteins form hemichannels in situ in Sf9 cells that were then purified either as (1) Sf9 membrane fragments containing Cx26 hemichannels or (2) solubilized hemichannels. The latter were subsequently reconstituted in liposomes. AFM images of purified membrane fragments showed clusters of protein macromolecular structures in the membrane that at higher magnification corresponded to Cx26 hemichannels. Hemichannels reconstituted into DOPC bilayers displayed two populations of channel heights likely resulting from differences in orientations of inserted hemichannels. Hemichannels in the protein rich portions of purified membranes also showed a reduced channel height above the bilayer compared to membranes with reconstituted hemichannels perhaps due to reduced AFM probe access to the lipid bilayer. These preparations of purified membranes enriched for connexin hemichannels that have been properly trafficked and inserted in membranes provide a platform for high-resolution AFM imaging of the structure, interconnexon interactions, and cooperativity of properly trafficked and inserted noncrystalline connexin hemichannels.

Indexed as

Microscopy, Atomic ForceAnimalsCell MembraneConnexin 26ConnexinsDetergentsLipid BilayersPeptide FragmentsProtein StabilityRatsSf9 CellsSpodopteraConnexin 26ConnexinsDetergentsGjb2 protein, ratLipid BilayersPeptide Fragments

Identifiers

PMID25365227
PMCPMC4255643
OpenAlexW2320791372

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.