Evidence map›Paper›PMID 25365208›Full record

SynthesisPloS one2014

Association of HLA-DP/DQ and STAT4 polymorphisms with HBV infection outcomes and a mini meta-analysis.

Yun Liao, Bei Cai, Yi Li, Jie Chen, Chuanmin Tao, Hengjian Huang, Lanlan Wang

Abstract readMeta-Analysis
In one paragraph

Synthesis in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed, 3 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 3 syntheses or guidelines pooled it.

  1. Association ofBioscience reports · 2019
    Pooled it
  2. Pooled it
  3. Pooled it
  4. Article
  5. Article
  6. Possible association ofGlobal health & medicine · 2022
    Article
  7. Article
  8. Review
  9. Article
  10. STAT4: an immunoregulator contributing to diverse human diseases.International journal of biological sciences · 2020
    Review
  11. Review
  12. Review
  13. Article
  14. Article
  15. Article
  16. Observational
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Yun LiaoDepartment of Laboratory Medicine, West China Hospital, Sichuan University, Chengdu, Sichuan Province, China.
Bei CaiDepartment of Laboratory Medicine, West China Hospital, Sichuan University, Chengdu, Sichuan Province, China.
Yi LiDepartment of Laboratory Medicine, West China Hospital, Sichuan University, Chengdu, Sichuan Province, China.
Jie ChenDepartment of Laboratory Medicine, West China Hospital, Sichuan University, Chengdu, Sichuan Province, China.
Chuanmin TaoDepartment of Laboratory Medicine, West China Hospital, Sichuan University, Chengdu, Sichuan Province, China.
Hengjian HuangDepartment of Laboratory Medicine, West China Hospital, Sichuan University, Chengdu, Sichuan Province, China.
Lanlan WangDepartment of Laboratory Medicine, West China Hospital, Sichuan University, Chengdu, Sichuan Province, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThough HLA-DP/DQ is regarded to associate with HBV susceptibility and HBV natural clearance, its role in hepatocellular carcinoma (HCC) development is obscure. And the role of STAT4 in HBV susceptibility and clearance as well as HCC development is still contentious. Therefore, we conducted this study, aiming to clarify these obscure relationships.

methodsWe recruited 1312 Chinese Han subjects including healthy controls, HBV carriers and HCC patients in the experiment stage. The meta-analysis included 3467 HCC patients and 5821 HBV carriers to appraise the association with HCC development.

resultsConsistent with previous studies, HLA-DP/DQ associated with HBV susceptibility and HBV natural clearance (p<0.05). However, the experiment showed that HLA-DP rs3077, rs9277535 and rs7453920 did not associate with HCC development (dominant model, rs3077, OR = 0.86, 95%CI = 0.62-1.18; rs9277535, OR = 0.94, 95%CI = 0.68-1.30; rs7453920, OR = 0.75, 95%CI = 0.44-1.27). Meta-analysis again consolidated this conclusion (allele model, rs3077, OR = 0.94, 95%CI = 0.87-1.02; rs9277535, OR = 1.04, 95%CI = 0.97-1.11; rs7453920, OR = 0.89, 95%CI = 0.76-1.02). As for STAT4 rs7574865, we did not find any significant association with HBV susceptibility (OR = 0.91, 95%CI = 0.66-1.26) or HBV natural clearance (OR = 1.13, 95%CI = 0.86-1.49). Moreover, current data failed to acquire positive connection of rs7574865 with HCC development (experiment, OR = 0.86, 95%CI = 0.62-1.19; meta-analysis, OR = 0.87, 95%CI = 0.74-1.03), which may be due to the small sample size.

conclusionsHLA-DP/DQ polymorphisms (rs3077, rs9277535, rs7453920) did not associate with HCC development, but did correlate with HBV susceptibility and HBV natural clearance. STAT4 rs7574865 seemed not to correlate with HBV susceptibility or natural clearance. And it seemed rather ambiguous in its role on HCC development at present.

Indexed as

Polymorphism, GeneticAdultAllelesCarcinoma, HepatocellularCase-Control StudiesFemaleGenetic Association StudiesGenetic Predisposition to DiseaseHaplotypesHepatitis BHLA-DP AntigensHLA-DQ AntigensHumansLiver NeoplasmsMaleMiddle AgedHLA-DP AntigensHLA-DQ AntigensSTAT4 Transcription Factor

Identifiers

PMID25365208
PMCPMC4218798

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.