Evidence map›Paper›PMID 25362178›Full record

ArticleJournal of immunology (Baltimore, Md. : 1950)2014

Compartmentalization of simian immunodeficiency virus replication within secondary lymphoid tissues of rhesus macaques is linked to disease stage and inversely related to localization of virus-specific CTL.

Elizabeth Connick, Joy M Folkvord, Katherine T Lind, Eva G Rakasz, Brodie Miles, Nancy A Wilson, Mario L Santiago, Kimberly Schmitt, Edward B Stephens, Hyeon O Kim and 7 more

Open access · greenAbstract read
In one paragraph

Article in Journal of immunology (Baltimore, Md. : 1950), 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 110 papers.

0numbers the graph read from it
0cells of the map it votes in
110citing papers in PubMed
6.7field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

110 citing papers in PubMed, 140 citations in OpenAlex.

  1. Article
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  3. Review
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Compartmental structure in the secondary lymphoid tissue can slow downJournal of the Royal Society, Interface · 2025
    Article
  10. Article
  11. Article
  12. Delivering CRISPR to the HIV-1 reservoirs.Frontiers in microbiology · 2024
    Review
  13. Article
  14. Article
  15. Cytolytic CD8Science immunology · 2023
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article

50 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 5 institutions in 2 countries.

Elizabeth ConnickDivision of Infectious Diseases, Department of Medicine, University of Colorado Anschutz Medical Campus, Denver, CO 80045; liz.connick@ucdenver.edu.
Joy M FolkvordDivision of Infectious Diseases, Department of Medicine, University of Colorado Anschutz Medical Campus, Denver, CO 80045;
Katherine T LindDivision of Infectious Diseases, Department of Medicine, University of Colorado Anschutz Medical Campus, Denver, CO 80045;
Eva G RakaszWisconsin National Primate Research Center, University of Wisconsin-Madison, Madison, WI 53715;
Brodie MilesDivision of Infectious Diseases, Department of Medicine, University of Colorado Anschutz Medical Campus, Denver, CO 80045;
Nancy A WilsonWisconsin National Primate Research Center, University of Wisconsin-Madison, Madison, WI 53715;
Mario L SantiagoDivision of Infectious Diseases, Department of Medicine, University of Colorado Anschutz Medical Campus, Denver, CO 80045;
Kimberly SchmittDepartment of Microbiology, Molecular Genetics, and Immunology, University of Kansas Medical Center, Kansas City, KS 66160;
Edward B StephensDepartment of Microbiology, Molecular Genetics, and Immunology, University of Kansas Medical Center, Kansas City, KS 66160;
Hyeon O KimDepartment of Veterinary and Biomedical Sciences, University of Minnesota, St. Paul, MN;
Reece WagstaffDepartment of Veterinary and Biomedical Sciences, University of Minnesota, St. Paul, MN;
Shengbin LiDepartment of Veterinary and Biomedical Sciences, University of Minnesota, St. Paul, MN;
Hadia M AbdelaalDepartment of Veterinary and Biomedical Sciences, University of Minnesota, St. Paul, MN; Department of Microbiology and Immunology, Zagazig University, Zagazig, Egypt 44519; and.
Nathan KempDepartment of Veterinary and Biomedical Sciences, University of Minnesota, St. Paul, MN;
David I WatkinsWisconsin National Primate Research Center, University of Wisconsin-Madison, Madison, WI 53715;
Samantha MaWhinneyDepartment of Biostatistics and Informatics, University of Colorado Denver, Aurora, CO 80045.
Pamela J SkinnerDepartment of Veterinary and Biomedical Sciences, University of Minnesota, St. Paul, MN;
University of Minnesota · USUniversity of Colorado Anschutz Medical Campus · USUniversity of Wisconsin–Madison · USUniversity of Kansas Medical Center · USUniversity of Colorado Denver · US

Funding

WNPRC Supplemental Request for Nonhuman Primate Enclosures to Equip HIV/AIDS-Related Research FacilitiesP51OD011106 · OD · UNIVERSITY OF WISCONSIN-MADISON · PI Dorota A. Grejner-Brzezinska · 2012 to 2026
$150.7M
ZOLEDRONATE PREVENTS BONE LOSS IN OVARIECTOMIZED RHESUS MONKEYSP51RR000167 · NCRR · UNIVERSITY OF WISCONSIN-MADISON · PI WATKINS, DAVID I · 1985 to 2011
$106.7M
Nonhuman Primate Reagent ResourceU24AI126683 · NIAID · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI Diogo Magnani · 2016 to 2026
$20.1M
RESOURCE FOR NONHUMAN PRIMATE CELL DEPLETING ANTIBODIESR24RR016001 · NCRR · BETH ISRAEL DEACONESS MEDICAL CENTER · PI REIMANN, KEITH A. · 2000 to 2011
$8.1M
Resource for Nonhuman Primate Cell Depleting AntibodiesR24OD010976 · OD · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI ENGELMAN, KATHLEEN, MAGNANI, DIOGO · 2012 to 2019
$4.7M
Mechanisms Underlying Persistent Lentivirus Replication in Follicular T CellsR01AI096966 · NIAID · UNIVERSITY OF COLORADO DENVER · PI CONNICK, ELIZABETH, SKINNER, PAMELA J · 2013 to 2017
$4.2M
UNIVERSITY OF COLORADO HIV RESEARCH TRAINING PROGRAMT32AI007447 · NIAID · UNIVERSITY OF COLORADO DENVER · PI CAMPBELL, THOMAS B. · 1992 to 2016
$2.8M
Innate Restriction Factor Modulation of Retrovirus-specific Humoral ImmunityR01AI090795 · NIAID · UNIVERSITY OF COLORADO DENVER · PI SANTIAGO, MARIO LUIS · 2010 to 2013
$2.8M
CTL Exclusion from Lymphoid Follicles as a Mechanism of Lentivirus Immune InvasioR56AI080418 · NIAID · UNIVERSITY OF MINNESOTA · PI CONNICK, ELIZABETH, SKINNER, PAMELA J · 2010 to 2010
$750k
NCRR NIH HHS P51 RR000167NCRR NIH HHS P51RR000167NCRR NIH HHS R24 RR016001NIAID NIH HHS HHSN272200900037CNIAID NIH HHS HHSN272201300006CNIAID NIH HHS R01 AI090795NIAID NIH HHS R01AI090795NIAID NIH HHS R01 AI096966NIAID NIH HHS R01AI096966NIAID NIH HHS R56 AI080418NIAID NIH HHS R56AI080418NIAID NIH HHS T32 AI007447NIAID NIH HHS U24 AI126683NIH HHS P51 OD011106NIH HHS P51OD011106PHS HHS HHSN 2722000900037C
6 · The paper itself

Abstract

We previously demonstrated that HIV replication is concentrated in lymph node B cell follicles during chronic infection and that HIV-specific CTL fail to accumulate in large numbers at those sites. It is unknown whether these observations can be generalized to other secondary lymphoid tissues or whether virus compartmentalization occurs in the absence of CTL. We evaluated these questions in SIVmac239-infected rhesus macaques by quantifying SIV RNA(+) cells and SIV-specific CTL in situ in spleen, lymph nodes, and intestinal tissues obtained at several stages of infection. During chronic asymptomatic infection prior to simian AIDS, SIV-producing cells were more concentrated in follicular (F) compared with extrafollicular (EF) regions of secondary lymphoid tissues. At day 14 of infection, when CTL have minimal impact on virus replication, there was no compartmentalization of SIV-producing cells. Virus compartmentalization was diminished in animals with simian AIDS, which often have low-frequency CTL responses. SIV-specific CTL were consistently more concentrated within EF regions of lymph node and spleen in chronically infected animals regardless of epitope specificity. Frequencies of SIV-specific CTL within F and EF compartments predicted SIV RNA(+) cells within these compartments in a mixed model. Few SIV-specific CTL expressed the F homing molecule CXCR5 in the absence of the EF retention molecule CCR7, possibly accounting for the paucity of F CTL. These findings bolster the hypothesis that B cell follicles are immune privileged sites and suggest that strategies to augment CTL in B cell follicles could lead to improved viral control and possibly a functional cure for HIV infection.

Indexed as

AnimalsAntigens, ViralCell MovementCells, CulturedDisease ProgressionLymph NodesMacaca mulattaReceptors, CCR7Receptors, CXCR5RNA, ViralSimian Acquired Immunodeficiency SyndromeSimian Immunodeficiency VirusSpleenT-Lymphocytes, CytotoxicVirus ReplicationAntigens, ViralReceptors, CCR7Receptors, CXCR5RNA, Viral

Identifiers

PMID25362178
PMCPMC4239212
OpenAlexW2111434293

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.