Evidence map›Paper›PMID 25362050›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2014

Goniometer-based femtosecond crystallography with X-ray free electron lasers.

Aina E Cohen, S Michael Soltis, Ana González, Laura Aguila, Roberto Alonso-Mori, Christopher O Barnes, Elizabeth L Baxter, Winnie Brehmer, Aaron S Brewster, Axel T Brunger and 35 more

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 54 papers.

0numbers the graph read from it
0cells of the map it votes in
54citing papers in PubMed
9.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

54 citing papers in PubMed, 145 citations in OpenAlex.

  1. Article
  2. Article
  3. Microfluidic Devices for High-Throughput In Situ Serial Crystallography.Advances in biochemical engineering/biotechnology · 2026
    Review
  4. Review
  5. Review
  6. Article
  7. Review
  8. Article
  9. Article
  10. Structural basis of transcription: RNA polymerase II substrate binding and metal coordination using a free-electron laser.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  11. Deep residual networks for crystallography trained on synthetic data.Acta crystallographica. Section D, Structural biology · 2024
    Article
  12. Article
  13. Serial femtosecond crystallography.Nature reviews. Methods primers · 2022
    Article
  14. Article
  15. Article
  16. Review
  17. Serial Crystallography for Structure-Based Drug Discovery.Trends in pharmacological sciences · 2020
    Review
  18. Lard Injection Matrix for Serial Crystallography.International journal of molecular sciences · 2020
    Article
  19. Article
  20. Polysaccharide-Based Injection Matrix for Serial Crystallography.International journal of molecular sciences · 2020
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

45 authors at 9 institutions in 1 country.

Aina E CohenStanford Synchrotron Radiation Lightsource, HodgsonK@stanford.edu acohen@slac.stanford.edu.
S Michael SoltisStanford Synchrotron Radiation Lightsource.
Ana GonzálezStanford Synchrotron Radiation Lightsource.
Laura AguilaStanford Synchrotron Radiation Lightsource.
Roberto Alonso-MoriLinac Coherent Light Source, and.
Christopher O BarnesDepartment of Structural Biology, University of Pittsburgh School of Medicine, Pittsburgh, PA 15261;
Elizabeth L BaxterStanford Synchrotron Radiation Lightsource, Departments of Chemistry.
Winnie BrehmerStanford Synchrotron Radiation Lightsource.
Aaron S BrewsterPhysical Biosciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720;
Axel T BrungerMolecular and Cellular Physiology, and Howard Hughes Medical Institute, Stanford University, Stanford, CA 94305;
Guillermo CaleroDepartment of Structural Biology, University of Pittsburgh School of Medicine, Pittsburgh, PA 15261;
Joseph F ChangStanford Synchrotron Radiation Lightsource.
Matthieu CholletLinac Coherent Light Source, and.
Paul EhrensbergerStanford Synchrotron Radiation Lightsource.
Thomas L ErikssonStanford Synchrotron Radiation Lightsource.
Yiping FengLinac Coherent Light Source, and.
Johan HattnePhysical Biosciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720;
Britt HedmanStanford Synchrotron Radiation Lightsource.
Michael HollenbeckStanford Synchrotron Radiation Lightsource.
James M HoltonPhysical Biosciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720; Department of Biochemistry and Biophysics, University of California, San Francisco, CA 94158; and.
Stephen KeableDepartment of Chemistry and Biochemistry, Montana State University, Bozeman, MT 59715.
Brian K KobilkaMolecular and Cellular Physiology, and.
Elena G KovalevaStanford Synchrotron Radiation Lightsource.
Andrew C KruseMolecular and Cellular Physiology, and.
Henrik T LemkeLinac Coherent Light Source, and.
Guowu LinDepartment of Structural Biology, University of Pittsburgh School of Medicine, Pittsburgh, PA 15261;
Artem Y LyubimovMolecular and Cellular Physiology, and Howard Hughes Medical Institute, Stanford University, Stanford, CA 94305;
Aashish ManglikMolecular and Cellular Physiology, and.
Irimpan I MathewsStanford Synchrotron Radiation Lightsource.
Scott E McPhillipsStanford Synchrotron Radiation Lightsource.
Silke NelsonLinac Coherent Light Source, and.
John W PetersDepartment of Chemistry and Biochemistry, Montana State University, Bozeman, MT 59715.
Nicholas K SauterPhysical Biosciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720;
Clyde A SmithStanford Synchrotron Radiation Lightsource.
Jinhu SongStanford Synchrotron Radiation Lightsource.
Hilary P StevensonDepartment of Structural Biology, University of Pittsburgh School of Medicine, Pittsburgh, PA 15261;
Yingssu TsaiStanford Synchrotron Radiation Lightsource, Departments of Chemistry.
Monarin UervirojnangkoornMolecular and Cellular Physiology, and Howard Hughes Medical Institute, Stanford University, Stanford, CA 94305;
Vladimir VinetskyStanford Synchrotron Radiation Lightsource.
Soichi WakatsukiPhoton Science, SLAC National Accelerator Laboratory, Stanford University, Menlo Park, CA 94025; Structural Biology, and.
William I WeisMolecular and Cellular Physiology, and Structural Biology, and.
Oleg A ZadvornyyDepartment of Chemistry and Biochemistry, Montana State University, Bozeman, MT 59715.
Oliver B ZeldinMolecular and Cellular Physiology, and Howard Hughes Medical Institute, Stanford University, Stanford, CA 94305;
Diling ZhuLinac Coherent Light Source, and.
Keith O HodgsonStanford Synchrotron Radiation Lightsource, Departments of Chemistry, HodgsonK@stanford.edu acohen@slac.stanford.edu.
Stanford University · USStanford Synchrotron Radiation Lightsource · USLinac Coherent Light Source · USUniversity of Pittsburgh · USLawrence Berkeley National Laboratory · USMontana State University · USHoward Hughes Medical Institute · USSLAC National Accelerator Laboratory · USUniversity of California, San Francisco · US

Funding

X-ray Screening and Rapid Structure DeterminationP50GM082250 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI FRANKEL, ALAN D · 2007 to 2018
$48.8M
ZWITTERION SURFACTANT DDMAB FOR IMPROV STABIL OF PROTEINP41RR001209 · NCRR · STANFORD UNIVERSITY · PI GONZALEZ, ANA M · 1985 to 2011
$38.9M
X-ray Absorption Spectroscopy (XAS) pp.711-759P41GM103393 · NIGMS · STANFORD UNIVERSITY · PI HODGSON, KEITH O · 2012 to 2019
$30.6M
Yeast ExpressionP50GM073210 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI STROUD, ROBERT M · 2004 to 2013
$21.5M
Project 6 (Holton)U54GM094625 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI SALI, ANDREJ · 2010 to 2014
$8.0M
Molecular Biophysics Training Program at StanfordT32GM008294 · NIGMS · STANFORD UNIVERSITY · PI HUANG, KERWYN C. · 1989 to 2019
$7.4M
THE MECHANISM OF BETA2 ADRENOCEPTOR ACTIVATIONR01NS028471 · NINDS · STANFORD UNIVERSITY · PI KOBILKA, BRIAN K · 1990 to 2021
$6.7M
Structural Studies of RNA Polymerase II Transcription Initiation and ElongationR01GM112686 · NIGMS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI CALERO, GUILLERMO ALBERTO · 2015 to 2024
$2.8M
Realizing New Horizons in X-ray Crystallography Data ProcessingR01GM095887 · NIGMS · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI SAUTER, NICHOLAS K · 2011 to 2014
$1.5M
Towards real-time XFEL data reduction with CCTBXR01GM102520 · NIGMS · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI SAUTER, NICHOLAS K · 2012 to 2015
$1.4M
Howard Hughes Medical InstituteNCRR NIH HHS P41 RR001209NIGMS NIH HHS GM073210NIGMS NIH HHS GM082250NIGMS NIH HHS GM094625NIGMS NIH HHS GM095887NIGMS NIH HHS GM102520NIGMS NIH HHS P41 GM103393NIGMS NIH HHS P41GM103393NIGMS NIH HHS P50 GM073210NIGMS NIH HHS P50 GM082250NIGMS NIH HHS R01 GM095887NIGMS NIH HHS R01 GM102520NIGMS NIH HHS R01 GM112686NIGMS NIH HHS T32 GM008294NIGMS NIH HHS U54 GM094625NINDS NIH HHS R01 NS028471
6 · The paper itself

Abstract

The emerging method of femtosecond crystallography (FX) may extend the diffraction resolution accessible from small radiation-sensitive crystals and provides a means to determine catalytically accurate structures of acutely radiation-sensitive metalloenzymes. Automated goniometer-based instrumentation developed for use at the Linac Coherent Light Source enabled efficient and flexible FX experiments to be performed on a variety of sample types. In the case of rod-shaped Cpl hydrogenase crystals, only five crystals and about 30 min of beam time were used to obtain the 125 still diffraction patterns used to produce a 1.6-Å resolution electron density map. For smaller crystals, high-density grids were used to increase sample throughput; 930 myoglobin crystals mounted at random orientation inside 32 grids were exposed, demonstrating the utility of this approach. Screening results from cryocooled crystals of β2-adrenoreceptor and an RNA polymerase II complex indicate the potential to extend the diffraction resolution obtainable from very radiation-sensitive samples beyond that possible with undulator-based synchrotron sources.

Indexed as

Protein ConformationChemistry, PhysicalCrystallizationCrystallography, X-RayElectronsLasersModels, MolecularMyoglobinProteinsReceptors, Adrenergic, beta-2Reproducibility of ResultsRNA Polymerase IISynchrotronsX-Ray DiffractionX-RaysMyoglobinProteinsReceptors, Adrenergic, beta-2RNA Polymerase IIcrystallographyfemtosecond diffractionstructural biologyXFEL

Identifiers

PMID25362050
PMCPMC4260607
OpenAlexW2073679797

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.