Evidence map›Paper›PMID 25360794›Full record

ArticleThe Biochemical journal2015

Circular trimers of gelatinase B/matrix metalloproteinase-9 constitute a distinct population of functional enzyme molecules differentially regulated by tissue inhibitor of metalloproteinases-1.

Jennifer Vandooren, Benjamin Born, Inna Solomonov, Ewa Zajac, Radka Saldova, Michael Senske, Estefanía Ugarte-Berzal, Erik Martens, Philippe E Van den Steen, Jo Van Damme and 8 more

Open access · greenAbstract read
In one paragraph

Article in The Biochemical journal, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 41 citations in OpenAlex.

  1. Exploring the Regulatory Function of NGAL in MMP-9 Complexes.Computational and structural biotechnology journal · 2026
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  3. Tissue inhibitors of metalloproteinases are proteolytic targets of matrix metalloproteinase 9.Matrix biology : journal of the International Society for Matrix Biology · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 6 institutions in 5 countries.

Jennifer Vandooren*Laboratory of Immunobiology, Rega Institute for Medical Research, University of Leuven, KU Leuven, B-3000 Leuven, Belgium.
Benjamin Born†Department of Biological Regulation, Weizmann Institute of Science, Rehovot 76100, Israel.
Inna Solomonov†Department of Biological Regulation, Weizmann Institute of Science, Rehovot 76100, Israel.
Ewa Zajac‡Department of Cell and Molecular Biology, The Scripps Research Institute, La Jolla, CA 92037, U.S.A.
Radka Saldova§NIBRT GlycoScience Group, National Institute for Bioprocessing Research and Training, Fosters Avenue, Mount Merrion, Blackrock, Dublin 4, Ireland.
Michael Senske†Department of Biological Regulation, Weizmann Institute of Science, Rehovot 76100, Israel.
Estefanía Ugarte-Berzal║Cellular and Molecular Medicine Department, Centro de Investigaciones Biológicas, Consejo Superior de Investigaciones Científicas (CSIC), 28040 Madrid, Spain.
Erik Martens*Laboratory of Immunobiology, Rega Institute for Medical Research, University of Leuven, KU Leuven, B-3000 Leuven, Belgium.
Philippe E Van den Steen*Laboratory of Immunobiology, Rega Institute for Medical Research, University of Leuven, KU Leuven, B-3000 Leuven, Belgium.
Jo Van Damme**Laboratory of Molecular Immunology, Rega Institute for Medical Research, University of Leuven, KU Leuven, B-3000 Leuven, Belgium.
Angeles Garcia-Pardo║Cellular and Molecular Medicine Department, Centro de Investigaciones Biológicas, Consejo Superior de Investigaciones Científicas (CSIC), 28040 Madrid, Spain.
Matheus Froeyen††Laboratory of Medicinal Chemistry, Rega Institute for Medical Research, University of Leuven, KU Leuven, B-3000 Leuven, Belgium.
Elena I Deryugina‡Department of Cell and Molecular Biology, The Scripps Research Institute, La Jolla, CA 92037, U.S.A.
James P Quigley‡Department of Cell and Molecular Biology, The Scripps Research Institute, La Jolla, CA 92037, U.S.A.
Søren K Moestrup‡‡Department of Biomedicine, University of Aarhus, DK-8000 Aarhus C, Denmark.
Pauline M Rudd§NIBRT GlycoScience Group, National Institute for Bioprocessing Research and Training, Fosters Avenue, Mount Merrion, Blackrock, Dublin 4, Ireland.
Irit Sagi†Department of Biological Regulation, Weizmann Institute of Science, Rehovot 76100, Israel.
Ghislain Opdenakker*Laboratory of Immunobiology, Rega Institute for Medical Research, University of Leuven, KU Leuven, B-3000 Leuven, Belgium.
KU Leuven · BEWeizmann Institute of Science · ILConsejo Superior de Investigaciones Científicas · ESNational Institute for Bioprocessing Research and Training · IERega Institute for Medical Research · BEUniversity of Southern Denmark · DK

Funding

Transmembrane Proteins Involved in Human Tumor ExpansionR01CA105412 · NCI · SCRIPPS RESEARCH INSTITUTE, THE · PI QUIGLEY, JAMES P · 2004 to 2020
$5.8M
Role of Inflammatory Neutrophils and their Unique MMP-9 in Tumor ProgressionR01CA157792 · NCI · SCRIPPS RESEARCH INSTITUTE, THE · PI DERYUGINA, ELENA I · 2012 to 2016
$1.9M
NCI NIH HHS 1R01CA157792NCI NIH HHS R01 CA105412NCI NIH HHS R01 CA157792
6 · The paper itself

Abstract

Gelatinase B/matrix metalloproteinase-9 (MMP-9) (EC 3.4.24.35) cleaves many substrates and is produced by most cell types as a zymogen, proMMP-9, in complex with the tissue inhibitor of metalloproteinases-1 (TIMP-1). Natural proMMP-9 occurs as monomers, homomultimers and heterocomplexes, but our knowledge about the overall structure of proMMP-9 monomers and multimers is limited. We investigated biochemical, biophysical and functional characteristics of zymogen and activated forms of MMP-9 monomers and multimers. In contrast with a conventional notion of a dimeric nature of MMP-9 homomultimers, we demonstrate that these are reduction-sensitive trimers. Based on the information from electrophoresis, AFM and TEM, we generated a 3D structure model of the proMMP-9 trimer. Remarkably, the proMMP-9 trimers possessed a 50-fold higher affinity for TIMP-1 than the monomers. In vivo, this finding was reflected in a higher extent of TIMP-1 inhibition of angiogenesis induced by trimers compared with monomers. Our results show that proMMP-9 trimers constitute a novel structural and functional entity that is differentially regulated by TIMP-1.

Indexed as

Models, MolecularEnzyme PrecursorsMatrix Metalloproteinase 9Microscopy, Atomic ForceMicroscopy, Electron, TransmissionMultiprotein ComplexesTissue Inhibitor of Metalloproteinase-1Enzyme PrecursorsMatrix Metalloproteinase 9MMP9 protein, humanMultiprotein Complexespro-matrix metalloproteinase 9TIMP1 protein, humanTissue Inhibitor of Metalloproteinase-1

Identifiers

PMID25360794
PMCPMC4399976
OpenAlexW2323788043

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.