Evidence map›Paper›PMID 25360588›Full record

ArticlePloS one2014

Polymorphisms in the interleukin 18 receptor 1 gene and tuberculosis susceptibility among Chinese.

Junxian Zhang, Li Zheng, Donglin Zhu, Huiru An, Yourong Yang, Yan Liang, Weiguo Zhao, Wenjun Ding, Xueqiong Wu

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed, 1 pooled it
2.0field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 1 synthesis or guideline pooled it, 25 citations in OpenAlex.

  1. Pooled it
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  9. Interleukin-18 in Health and Disease.International journal of molecular sciences · 2019
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Junxian ZhangArmy Tuberculosis Prevention and Control Key Laboratory, Institute for Tuberculosis Research, the 309th Hospital of Chinese PLA, Beijing, P. R. China.
Li ZhengLaboratory of Environment and Health, College of Life Sciences, University of Chinese Academy of Sciences, Beijing, P. R. China.
Donglin ZhuArmy Tuberculosis Prevention and Control Key Laboratory, Institute for Tuberculosis Research, the 309th Hospital of Chinese PLA, Beijing, P. R. China.
Huiru AnArmy Tuberculosis Prevention and Control Key Laboratory, Institute for Tuberculosis Research, the 309th Hospital of Chinese PLA, Beijing, P. R. China.
Yourong YangArmy Tuberculosis Prevention and Control Key Laboratory, Institute for Tuberculosis Research, the 309th Hospital of Chinese PLA, Beijing, P. R. China.
Yan LiangArmy Tuberculosis Prevention and Control Key Laboratory, Institute for Tuberculosis Research, the 309th Hospital of Chinese PLA, Beijing, P. R. China.
Weiguo ZhaoArmy Tuberculosis Prevention and Control Key Laboratory, Institute for Tuberculosis Research, the 309th Hospital of Chinese PLA, Beijing, P. R. China.
Wenjun DingLaboratory of Environment and Health, College of Life Sciences, University of Chinese Academy of Sciences, Beijing, P. R. China.
Xueqiong WuArmy Tuberculosis Prevention and Control Key Laboratory, Institute for Tuberculosis Research, the 309th Hospital of Chinese PLA, Beijing, P. R. China.
The 309th Hospital of Chinese People's Liberation Army · CNUniversity of Chinese Academy of Sciences · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Tuberculosis (TB), an infectious disease caused by infection of Mycobacterium tuberculosis, is a major public health challenge globally. Genetic epidemiological evidence suggests a genetic basis for TB, but the molecular mechanism for a genetic predisposition to TB remains largely unknown. Thirty-five tag single-nucleotide polymorphisms (SNPs) across 11 candidate cytokines and related genes, including IL-12/IFN-γ axis genes (IL12B, IL12RB1, IL18R1, IL27, IFNGR1, IFNGR2 and STAT1), the TNF gene locus (TNF and LTA), IL10, and CCL2, were genotyped using Sequenom's iPLEX assays in 1,032 patients with TB and 1,008 controls of Chinese Han origin. We did not find that any of the 35 tag SNPs individually or as haplotypes was significantly associated with susceptibility to TB, on the basis of multivariable logistic regression analysis with adjustment for age and sex. However, stratification analyses showed that, in those with age 46 years or older, carrying the rs1974675 T allele in the IL18R1 gene had a significantly decreased susceptibility to TB occurrence compared with carrying the C/C genotype (OR = 0.57, P = 5.0×10(-4)). Further analysis indicated that a SNP in absolute linkage disequilibrium with rs1974675, rs3755276, is located within a CpG dinucleotide and showed hypomethylation in controls than in patients (19.6% vs. 31.4%; P = 1.0×10(-4)) and genotype-specific DNA methylation at the IL18R1 promoter and IL18R1 mRNA levels. In addition, DNA methylation levels were significantly inversely correlated with mRNA levels. Thus, decreased mRNA levels of IL18R1 due to rs3755276 may partially mediate the increased susceptibility to TB risk.

Indexed as

Polymorphism, Single NucleotideAdultAsian PeopleCase-Control StudiesDNA MethylationFemaleGene Expression RegulationGenetic Predisposition to DiseaseHumansInterferon-gammaInterleukin-12Interleukin-18 Receptor alpha SubunitMaleMiddle AgedPromoter Regions, GeneticRNA, MessengerInterferon-gammaInterleukin-12Interleukin-18 Receptor alpha SubunitRNA, Messenger

Identifiers

PMID25360588
PMCPMC4216003
OpenAlexW1964545673

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.