Evidence map›Paper›PMID 25357075›Full record

ArticlePloS one2014

Gene profiling of postnatal Mfrprd6 mutant eyes reveals differential accumulation of Prss56, visual cycle and phototransduction mRNAs.

Ramani Soundararajan, Jungyeon Won, Timothy M Stearns, Jeremy R Charette, Wanda L Hicks, Gayle B Collin, Jürgen K Naggert, Mark P Krebs, Patsy M Nishina

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
0.7field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 27 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 2 countries.

Ramani SoundararajanThe Jackson Laboratory, Bar Harbor, Maine, United States of America.
Jungyeon WonNational Disaster Management Institute, Seoul, Korea.
Timothy M StearnsThe Jackson Laboratory, Bar Harbor, Maine, United States of America.
Jeremy R CharetteThe Jackson Laboratory, Bar Harbor, Maine, United States of America.
Wanda L HicksThe Jackson Laboratory, Bar Harbor, Maine, United States of America.
Gayle B CollinThe Jackson Laboratory, Bar Harbor, Maine, United States of America.
Jürgen K NaggertThe Jackson Laboratory, Bar Harbor, Maine, United States of America.
Mark P KrebsThe Jackson Laboratory, Bar Harbor, Maine, United States of America.
Patsy M NishinaThe Jackson Laboratory, Bar Harbor, Maine, United States of America.
Jackson Laboratory · USNational Disaster Management Research Institute · KR

Funding

Shared Resource ManagementP30CA034196 · NCI · JACKSON LABORATORY · PI William Carl Skarnes · 1985 to 2026
$61.9M
RETINAL DISEASE: MOLECULAR BASIS AND PATHOPHYSIOLOGYR01EY011996 · NEI · JACKSON LABORATORY · PI Patsy M Nishina · 1998 to 2026
$12.4M
NCI NIH HHS 5P30CA034196NCI NIH HHS P30 CA034196NEI NIH HHS EY011996NEI NIH HHS R01 EY011996
6 · The paper itself

Abstract

Mutations in the membrane frizzled-related protein (MFRP/Mfrp) gene, specifically expressed in the retinal pigment epithelium (RPE) and ciliary body, cause nanophthalmia or posterior microphthalmia with retinitis pigmentosa in humans, and photoreceptor degeneration in mice. To better understand MFRP function, microarray analysis was performed on eyes of homozygous Mfrprd6 and C57BL/6J mice at postnatal days (P) 0 and P14, prior to photoreceptor loss. Data analysis revealed no changes at P0 but significant differences in RPE and retina-specific transcripts at P14, suggesting a postnatal influence of the Mfrprd6 allele. A subset of these transcripts was validated by quantitative real-time PCR (qRT-PCR). In Mfrprd6 eyes, a significant 1.5- to 2.0-fold decrease was observed among transcripts of genes linked to retinal degeneration, including those involved in visual cycle (Rpe65, Lrat, Rgr), phototransduction (Pde6a, Guca1b, Rgs9), and photoreceptor disc morphogenesis (Rpgrip1 and Fscn2). Levels of RPE65 were significantly decreased by 2.0-fold. Transcripts of Prss56, a gene associated with angle-closure glaucoma, posterior microphthalmia and myopia, were increased in Mfrprd6 eyes by 17-fold. Validation by qRT-PCR indicated a 3.5-, 14- and 70-fold accumulation of Prss56 transcripts relative to controls at P7, P14 and P21, respectively. This trend was not observed in other RPE or photoreceptor mutant mouse models with similar disease progression, suggesting that Prss56 upregulation is a specific attribute of the disruption of Mfrp. Prss56 and Glul in situ hybridization directly identified Müller glia in the inner nuclear layer as the cell type expressing Prss56. In summary, the Mfrprd6 allele causes significant postnatal changes in transcript and protein levels in the retina and RPE. The link between Mfrp deficiency and Prss56 up-regulation, together with the genetic association of human MFRP or PRSS56 variants and ocular size, raises the possibility that these genes are part of a regulatory network influencing postnatal posterior eye development.

Indexed as

Eye ProteinsGene Expression Regulation, EnzymologicMembrane ProteinsUp-RegulationAnimalsFrizzled-Related ProteinsGene Expression ProfilingHumansMiceMice, Mutant StrainsMicrophthalmosRetinaRetinitis PigmentosaSerine ProteasesVision, OcularEye ProteinsFrizzled-Related ProteinsMembrane ProteinsMfrp protein, mouseSerine Proteases

Identifiers

PMID25357075
PMCPMC4214712
OpenAlexW2008961134

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.