Evidence map›Paper›PMID 25354391›Full record

ArticleAngewandte Chemie (International ed. in English)2014

Visualizing the chain-flipping mechanism in fatty-acid biosynthesis.

Joris Beld, Hu Cang, Michael D Burkart

Open access · greenAbstract read
In one paragraph

Article in Angewandte Chemie (International ed. in English), 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 53 citations in OpenAlex.

  1. Article
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  9. Review
  10. Control of Unsaturation inBiochemistry · 2022
    Article
  11. Article
  12. Article
  13. Decoding allosteric regulation by the acyl carrier protein.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  14. Deciphering the Binding Interactions betweenInternational journal of molecular sciences · 2021
    Article
  15. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Joris BeldDepartment of Chemistry and Biochemistry, University of California San Diego, 9500 Gilman Drive, La Jolla, CA 92093-0358 (USA).
Hu Cang
Michael D Burkart
University of California, San Diego · USSalk Institute for Biological Studies · US

Funding

Protein-Protein Interactions in Natural Product BiosynthesisR01GM095970 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI BURKART, MICHAEL D. · 2012 to 2025
$5.9M
OASIS to identify and analyze natural product biosynthesisR01GM094924 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI BURKART, MICHAEL D. · 2010 to 2013
$1.2M
NIGMS NIH HHS R01 GM094924NIGMS NIH HHS R01GM094924NIGMS NIH HHS R01 GM095970NIGMS NIH HHS R01GM095970
6 · The paper itself

Abstract

The acyl carrier protein (ACP) from fatty acid synthases sequesters elongating products within its hydrophobic core, but this dynamic mechanism remains poorly understood. We exploited solvatochromic pantetheine probes attached to ACP that fluoresce when sequestered. The addition of a catalytic partner lures the cargo out of the ACP and into the active site of the enzyme, thus enhancing fluorescence to reveal the elusive chain-flipping mechanism. This activity was confirmed by the use of a dual solvatochromic cross-linking probe and solution-phase NMR spectroscopy. The chain-flipping mechanism was visualized by single-molecule fluorescence techniques, thus demonstrating specificity between the Escherichia coli ACP and its ketoacyl synthase catalytic partner KASII.

Indexed as

Acyl Carrier ProteinFatty AcidsNaphthalimidesNuclear Magnetic Resonance, BiomolecularOxadiazolesProtein Interaction Domains and MotifsRhodaminesSolvents4-N,N-dimethylamino-1,8-naphthalimide7-nitrobenz-2-oxa-1,3-diazoleAcyl Carrier ProteinFatty AcidsNaphthalimidesOxadiazolesrhodamine BRhodaminesSolventsacyl carrier proteinchain-flipping mechanismfatty acidsfatty acid synthasesolvatochromism

Identifiers

PMID25354391
PMCPMC4425425
OpenAlexW2140054852

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.