Evidence map›Paper›PMID 25353955›Full record

ArticlePloS one2014

High throughput identification of monoclonal antibodies to membrane bound and secreted proteins using yeast and phage display.

Lequn Zhao, Liang Qu, Jing Zhou, Zhengda Sun, Hao Zou, Yunn-Yi Chen, James D Marks, Yu Zhou

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 16 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Discovery of internalizing antibodies to basal breast cancer cells.Protein engineering, design & selection : PEDS · 2018
    Article
  5. Review
  6. Article
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Lequn ZhaoDepartment of Anesthesia and Perioperative Care, University of California San Francisco, San Francisco General Hospital, San Francisco, California, United States of America.
Liang QuDepartment of Anesthesia and Perioperative Care, University of California San Francisco, San Francisco General Hospital, San Francisco, California, United States of America.
Jing ZhouDepartment of Anesthesia and Perioperative Care, University of California San Francisco, San Francisco General Hospital, San Francisco, California, United States of America.
Zhengda SunDepartment of Anesthesia and Perioperative Care, University of California San Francisco, San Francisco General Hospital, San Francisco, California, United States of America.
Hao ZouDepartment of Anesthesia and Perioperative Care, University of California San Francisco, San Francisco General Hospital, San Francisco, California, United States of America.
Yunn-Yi ChenDepartments of Pathology & Laboratory Medicine, University of California San Francisco, San Francisco, California, United States of America.
James D MarksDepartment of Anesthesia and Perioperative Care, University of California San Francisco, San Francisco General Hospital, San Francisco, California, United States of America.
Yu ZhouDepartment of Anesthesia and Perioperative Care, University of California San Francisco, San Francisco General Hospital, San Francisco, California, United States of America.
University of California, San Francisco · USSan Francisco General Hospital · US

Funding

Tissue and Outcomes CoreP50CA058207 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI GRAY, JOE W. · 1992 to 2012
$32.7M
NCI NIH HHS P50 CA058207NCI NIH HHS P50 CA58207
6 · The paper itself

Abstract

Antibodies are ubiquitous and essential reagents for biomedical research. Uses of antibodies include quantifying proteins, identifying the temporal and spatial pattern of expression in cells and tissue, and determining how proteins function under normal or pathological conditions. Specific antibodies are only available for a small portion of the proteome, limiting study of those proteins for which antibodies do not exist. The technologies to generate target-specific antibodies need to be improved to obtain high quality antibodies to the proteome at reasonable cost. Here we show that renewable, validated, and standardized monoclonal antibodies can be generated at high throughput, without the need for antigen production or animal immunizations. In this study, 60 protein domains from 24 selected secreted proteins were expressed on the surface of yeast and used for selection of phage antibodies, over 400 monoclonal antibodies were identified within 3 weeks. A subset of these antibodies was validated for binding to cancer cells that overexpress the target protein by flow cytometry or immunohistochemistry. This approach will be applicable to many of the membrane-bound and the secreted proteins, 20-40% of the proteome, accelerating the timeline for Ab generation while reducing the cost.

Indexed as

Antibodies, MonoclonalAntibodies, ViralBacteriophagesCell Line, TumorHEK293 CellsHigh-Throughput Screening AssaysHumansMembrane ProteinsProtein BindingSaccharomyces cerevisiaeAntibodies, MonoclonalAntibodies, ViralMembrane Proteins

Identifiers

PMID25353955
PMCPMC4213037
OpenAlexW2084667397

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.