Evidence map›Paper›PMID 25353356›Full record

ArticleAIDS research and human retroviruses2015

Distinct patterns of Bcl-2 expression occur in R5- and X4-tropic HIV-1-producing lymphoid tissue cells infected ex vivo.

Michelle K Haas, David N Levy, Joy M Folkvord, Elizabeth Connick

Open access · greenAbstract read
In one paragraph

Article in AIDS research and human retroviruses, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.5field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Article
  6. Review
  7. Article
  8. Tissue reservoirs of HIV.Current opinion in HIV and AIDS · 2016
    Review
  9. Review
  10. Article
  11. Review
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Michelle K Haas1 Division of Infectious Diseases, Department of Medicine, University of Colorado , Denver, Aurora, Colorado.
David N Levy
Joy M Folkvord
Elizabeth Connick
University of Colorado Denver · USNew York University · US

Funding

U of Colorado Center for AIDS ResearchP30AI054907 · NIAID · UNIVERSITY OF COLORADO DENVER · PI WILSON, CARA C. · 2003 to 2008
$9.6M
Mechanisms Underlying Persistent Lentivirus Replication in Follicular T CellsR01AI096966 · NIAID · UNIVERSITY OF COLORADO DENVER · PI CONNICK, ELIZABETH, SKINNER, PAMELA J · 2013 to 2017
$4.2M
UNIVERSITY OF COLORADO HIV RESEARCH TRAINING PROGRAMT32AI007447 · NIAID · UNIVERSITY OF COLORADO DENVER · PI CAMPBELL, THOMAS B. · 1992 to 2016
$2.8M
HIV-1 Replication Without IntegrationR01AI078783 · NIAID · NEW YORK UNIVERSITY · PI LEVY, DAVID N · 2009 to 2013
$2.1M
CTL Exclusion from Lymphoid Follicles as a Mechanism of Lentivirus Immune InvasioR56AI080418 · NIAID · UNIVERSITY OF MINNESOTA · PI CONNICK, ELIZABETH, SKINNER, PAMELA J · 2010 to 2010
$750k
NIAID NIH HHS P30 AI054907NIAID NIH HHS R01 AI078783NIAID NIH HHS R56 AI080418NIAID NIH HHS T32 AI07447
6 · The paper itself

Abstract

Most HIV-1 replication occurs in secondary lymphoid tissues in T cells within B cell follicles. Mechanisms underlying the accumulation of HIV-1-producing cells at these sites are not understood. Antiapoptotic proteins such as Bcl-2 could promote follicular CD4(+) T cell survival, contributing to sustained virus production. Tonsils obtained from subjects without known HIV infection were disaggregated and analyzed for Bcl-2 expression in follicular (CXCR5(+)) and extrafollicular (CXCR5(-)) CD3(+)CD4(+) cells by flow cytometry. Additional tonsil cells were cultured with phytohemagglutinin (PHA) and interleukin-2 (IL-2) for 2 days, infected with either CCR5(R5) or CXCR4-tropic (X4) GFP reporter viruses, and analyzed for Bcl-2 expression. In freshly disaggregated CD3(+)CD4(+) tonsil cells, mean florescence intensity (MFI) for Bcl-2 was higher in CXCR5(+) (median, 292) compared to CXCR5(-) cells (median, 194; p=0.001). Following in vitro stimulation with PHA and IL-2, Bcl-2 MFI was higher in both CXCR5(+) cells (median, 757; p=0.03) and CXCR5(-) cells (median, 884; p=0.002) in uninfected cultures compared to freshly isolated tonsil cells. Bcl-2 MFI was higher in GFP(+)CD3(+)CD8(-) R5-producing cells (median, 554) than in X4-producing cells (median, 393; p=0.02). Bcl-2 MFI was higher in R5-producing CXCR5(+) cells (median, 840) compared to all other subsets including R5-producing CXCR5(-) cells (median, 524; p=0.04), X4-producing CXCR5(+) cells (median, 401; p=0.02), and X4-producing CXCR5(-) cells (median, 332; p=0.008). Bcl-2 expression is elevated in R5 HIV-1-producing CXCR5(+) T cells in vitro, which may contribute to propagation of R5 virus in B cell follicles in vivo.

Indexed as

AdolescentCD4-Positive T-LymphocytesChildChild, PreschoolFemaleGene Expression ProfilingHIV-1HumansImmunophenotypingLymphoid TissueMaleProto-Oncogene Proteins c-bcl-2Receptors, CXCR4Receptors, CXCR5Receptors, HIVCXCR4 protein, humanCXCR5 protein, humanProto-Oncogene Proteins c-bcl-2Receptors, CXCR4Receptors, CXCR5Receptors, HIV

Identifiers

PMID25353356
PMCPMC4348367
OpenAlexW2312874323

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.