ArticleJournal of the American Medical Informatics Association : JAMIA2015
Taking advantage of continuity of care documents to populate a research repository.
Article in Journal of the American Medical Informatics Association : JAMIA, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT03911687 (Communicating Narrative Concerns Entered by RNs), which is not on this map. Cited by 13 papers, 1 of them a synthesis that pooled it.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Communicating Narrative Concerns Entered by RNs (CONCERN) Clinical Decision Support (CDS) System
Who cites it
13 citing papers in PubMed, 1 synthesis or guideline pooled it.
- Advancing Partner Notification Through Electronic Communication Technology: A Review of Acceptability and Utilization Research.Journal of health communication · 2016Pooled it
- Characterizing Basic and Complex Usage of i2b2 at an Academic Medical Center.AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science · 2020Article
- Web services for data warehouses: OMOP and PCORnet on i2b2.Journal of the American Medical Informatics Association : JAMIA · 2018Article
- Implementation of informatics for integrating biology and the bedside (i2b2) platform as Docker containers.BMC medical informatics and decision making · 2018Article
- Automating Installation of the Integrating Biology and the Bedside (i2b2) Platform.Biomedical informatics insights · 2018Review
- Automated Population of an i2b2 Clinical Data Warehouse using FHIR.AMIA ... Annual Symposium proceedings. AMIA Symposium · 2018Article
- Interoperability Progress and Remaining Data Quality Barriers of Certified Health Information Technologies.AMIA ... Annual Symposium proceedings. AMIA Symposium · 2018Article
- Implementation of a scalable, web-based, automated clinical decision support risk-prediction tool for chronic kidney disease using C-CDA and application programming interfaces.Journal of the American Medical Informatics Association : JAMIA · 2017Article
- Perceived barriers to partner notification among sexually transmitted infection clinic patients, Cape Town, South Africa.Journal of public health (Oxford, England) · 2017Article
- SMART-on-FHIR implemented over i2b2.Journal of the American Medical Informatics Association : JAMIA · 2017Article
- Evolving Research Data Sharing Networks to Clinical App Sharing Networks.AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science · 2017Article
- Clinical Decision Support: a 25 Year Retrospective and a 25 Year Vision.Yearbook of medical informatics · 2016Review
- Supporting Multi-sourced Medication Information in i2b2.AMIA ... Annual Symposium proceedings. AMIA Symposium · 2015Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
8 authors.
Funding
Abstract
objectiveClinical data warehouses have accelerated clinical research, but even with available open source tools, there is a high barrier to entry due to the complexity of normalizing and importing data. The Office of the National Coordinator for Health Information Technology's Meaningful Use Incentive Program now requires that electronic health record systems produce standardized consolidated clinical document architecture (C-CDA) documents. Here, we leverage this data source to create a low volume standards based import pipeline for the Informatics for Integrating Biology and the Bedside (i2b2) clinical research platform. We validate this approach by creating a small repository at Partners Healthcare automatically from C-CDA documents. MATERIALS AND
methodsWe designed an i2b2 extension to import C-CDAs into i2b2. It is extensible to other sites with variances in C-CDA format without requiring custom code. We also designed new ontology structures for querying the imported data.
resultsWe implemented our methodology at Partners Healthcare, where we developed an adapter to retrieve C-CDAs from Enterprise Services. Our current implementation supports demographics, encounters, problems, and medications. We imported approximately 17 000 clinical observations on 145 patients into i2b2 in about 24 min. We were able to perform i2b2 cohort finding queries and view patient information through SMART apps on the imported data. DISCUSSION: This low volume import approach can serve small practices with local access to C-CDAs and will allow patient registries to import patient supplied C-CDAs. These components will soon be available open source on the i2b2 wiki.
conclusionsOur approach will lower barriers to entry in implementing i2b2 where informatics expertise or data access are limited.
Indexed as
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.