Evidence map›Paper›PMID 25351986›Full record

ArticleFASEB journal : official publication of the Federation of American Societies for Experimental Biology2015

Identification and characterization of a novel promoter for the human ANO1 gene regulated by the transcription factor signal transducer and activator of transcription 6 (STAT6).

Amelia Mazzone, Simon J Gibbons, Cheryl E Bernard, Somaira Nowsheen, Sumit Middha, Luciana L Almada, Tamas Ordog, Michael L Kendrick, K Marie Reid Lombardo, K Robert Shen and 3 more

Open access · greenAbstract read
In one paragraph

Article in FASEB journal : official publication of the Federation of American Societies for Experimental Biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 41 citations in OpenAlex.

  1. Trial
  2. Role of ANO1 in tumors and tumor immunity.Journal of cancer research and clinical oncology · 2022
    Review
  3. Polymodal Control of TMEM16x Channels and Scramblases.International journal of molecular sciences · 2022
    Review
  4. Rosiglitazone Ameliorates Spinal Cord InjuryOxidative medicine and cellular longevity · 2022
    Article
  5. Review
  6. The diverse roles of TMEM16A CaJournal of advanced research · 2021
    Review
  7. Article
  8. CaJournal of advanced research · 2021
    Article
  9. The Role of MicroRNA in the Airway Surface Liquid Homeostasis.International journal of molecular sciences · 2020
    Review
  10. Article
  11. Article
  12. Review
  13. Molecular mechanism of TMEM16A regulation: role of CaMKII and PP1/PP2A.American journal of physiology. Cell physiology · 2019
    Article
  14. Article
  15. Review
  16. Article
  17. Direct repression of anoctamin 1 (FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2019
    Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 2 countries.

Amelia MazzoneEnteric NeuroScience Program.
Simon J GibbonsEnteric NeuroScience Program.
Cheryl E BernardEnteric NeuroScience Program.
Somaira NowsheenMayo Medical School.
Sumit MiddhaBiomedical Statistics and Informatics.
Luciana L AlmadaSchulze Center for Novel Therapeutics, Department of Oncology, and.
Tamas OrdogEnteric NeuroScience Program.
Michael L KendrickDepartment of Surgery, Mayo Clinic, Rochester, Minnesota, USA; and.
K Marie Reid LombardoDepartment of Surgery, Mayo Clinic, Rochester, Minnesota, USA; and.
K Robert ShenDepartment of Surgery, Mayo Clinic, Rochester, Minnesota, USA; and.
Luis J V GaliettaU.O.C. Genetica Medica, Istituto Giannina Gaslini, Genova, Italy.
Martin E Fernandez-ZapicoSchulze Center for Novel Therapeutics, Department of Oncology, and.
Gianrico FarrugiaEnteric NeuroScience Program, farrugia.gianrico@mayo.edu.
Mayo Clinic in Florida · USMayo Clinic · USNovel (United States) · USIstituto Giannina Gaslini · ITMayo Clinic in Arizona · US

Funding

PILOT AND FEASIBILTY PROGRAMP30DK084567 · NIDDK · MAYO CLINIC ROCHESTER · PI GREGORY J. GORES · 2009 to 2026
$22.2M
CALCIUM DYNAMICS IN INTERSTITIAL CELLS OF CAJALR01DK057061 · NIDDK · MAYO CLINIC ROCHESTER · PI GIANRICO FARRUGIA, Tamas Ordog · 2000 to 2026
$8.2M
NIDDK NIH HHS DK57061NIDDK NIH HHS P30 DK084567NIDDK NIH HHS R01 DK057061
6 · The paper itself

Abstract

Anoctamin-1 (Ano1) is a widely expressed protein responsible for endogenous Ca(2+)-activated Cl(-) currents. Ano1 is overexpressed in cancer. Differential expression of transcriptional variants is also found in other diseases. However, the mechanisms underlying regulation of Ano1 are unknown. This study identifies the Ano1 promoter and defines a mechanism for regulating its expression. Next-generation RNA sequencing (RNA-seq) analysis in human gastric muscle found a new exon upstream of the reported exon 1 and identified a promoter proximal to this new exon. Reporter assays in human embryonic kidney 293 cells showed a 6.7 ± 2.1-fold increase in activity over empty vector. Treatment with a known regulator of Ano1 expression, IL-4, increased promoter activity by 1.6 ± 0.02-fold over untreated cells. The promoter region contained putative binding sites for multiple transcription factors including signal transducer and activator of transcription 6 (STAT6), a downstream effector of IL-4. Chromatin immunoprecipitation (ChIP) experiments on T84 cells, which endogenously express Ano1, showed a 2.1 ± 0.12-fold increase in binding of STAT6 to P0 after IL-4 treatment. These results were confirmed by mutagenesis, expression, and RNA interference techniques. This work allows deeper understanding of the regulation of Ano1 in physiology and as a potential therapeutic target in a variety of diseases.

Indexed as

Promoter Regions, GeneticAnoctamin-1Base SequenceBinding SitesChloride ChannelsDNA MethylationExonsGene Expression RegulationGene Knockdown TechniquesHEK293 CellsHumansInterleukin-4Molecular Sequence DataMuscle, SmoothMutagenesis, Site-DirectedNeoplasm ProteinsANO1 protein, humanAnoctamin-1Chloride ChannelsIL4 protein, humanInterleukin-4Neoplasm ProteinsRNA, Small InterferingSTAT6 protein, humanSTAT6 Transcription Factoralternative splicingcalcium-activated chloride channelsTMEM16A

Identifiers

PMID25351986
PMCPMC4285536
OpenAlexW2014947812

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.