Evidence map›Paper›PMID 25351523›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2015

Map-based cloning of a candidate gene conferring Fusarium yellows resistance in Brassica oleracea.

Motoki Shimizu, Zi-jing Pu, Takahiro Kawanabe, Hiroyasu Kitashiba, Satoru Matsumoto, Yusuke Ebe, Monari Sano, Taketo Funaki, Eigo Fukai, Ryo Fujimoto and 1 more

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Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Vegetable biology and breeding in the genomics era.Science China. Life sciences · 2023
    Review
  5. Article
  6. Article
  7. In silico integration of disease resistance QTL, genes and markers with theMolecular breeding : new strategies in plant improvement · 2022
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Review
  16. Fine-mapping of a major QTL (Fwr1) for fusarium wilt resistance in radish.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2020
    Article
  17. Article
  18. Review
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Motoki ShimizuLaboratory of Plant Breeding, Graduate School of Science and Technology, Faculty of Agriculture, Niigata University, 2-8050, Ikarashi, Nishi-ku, Niigata, 950-2181, Japan.
Zi-jing Pu
Takahiro Kawanabe
Hiroyasu Kitashiba
Satoru Matsumoto
Yusuke Ebe
Monari Sano
Taketo Funaki
Eigo Fukai
Ryo Fujimoto
Keiichi Okazaki

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

key messageWe identified the candidate gene conferring yellow wilt resistance (YR) in B. oleracea . This work will facilitate YR breeding programs for B. oleracea and its closely related species. Yellow wilt disease is one of the most serious diseases of cabbage worldwide. Type A resistance to the disease is controlled by a single dominant gene that is used in cabbage breeding. Our previous QTL study identified the FocBo1 locus controlling type A resistance. In this study, the FocBo1 locus was fine-mapped by using 139 recombinant F2 plants derived from resistant cabbage (AnjuP01) and susceptible broccoli (GCP04) DH lines. As a result, we successfully delimited the location of FocBo1 within 1.00 cM between markers, BoInd 2 and BoInd 11. Analysis of BAC and cosmid sequences corresponding to the FocBo1 locus identified an orthologous gene of Bra012688 that was recently identified as an candidate gene that confers yellows resistance in Chinese cabbage. The candidate gene-specific DNA markers and phenotypes in F1 cabbage cultivars and their selfed F2 populations showed a perfect correlation. Our identification of the candidate gene for FocBo1 will assist introduction of fusarium resistance into B. oleracea cultivars and contribute further understanding of interaction between Brassica plants and fusarium.

Indexed as

Chromosome MappingFusariumBrassicaBreedingChromosomes, PlantCloning, MolecularDisease ResistanceDNA, PlantGenes, DominantGenes, PlantGenetic MarkersGenotypePhenotypePlant DiseasesSequence Analysis, DNASyntenyDNA, PlantGenetic Markers

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.