Evidence map›Paper›PMID 25350848›Full record

ArticleJournal of visualized experiments : JoVE2014

From a 2DE-gel spot to protein function: lesson learned from HS1 in chronic lymphocytic leukemia.

Benedetta Apollonio, Maria Teresa Sabrina Bertilaccio, Umberto Restuccia, Pamela Ranghetti, Federica Barbaglio, Paolo Ghia, Federico Caligaris-Cappio, Cristina Scielzo

Open access · greenAbstract readVideo-Audio Media
In one paragraph

Article in Journal of visualized experiments : JoVE, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.3field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Benedetta ApollonioDivision of Molecular Oncology, IRCCS, San Raffaele Scientific Institute; Department of Haemato-Oncology, King's College London.
Maria Teresa Sabrina BertilaccioDivision of Molecular Oncology, IRCCS, San Raffaele Scientific Institute.
Umberto RestucciaIFOM, FIRC Institute of Molecular Oncology.
Pamela RanghettiDivision of Molecular Oncology, IRCCS, San Raffaele Scientific Institute.
Federica BarbaglioDivision of Molecular Oncology, IRCCS, San Raffaele Scientific Institute.
Paolo GhiaDivision of Molecular Oncology, IRCCS, San Raffaele Scientific Institute; Università Vita-Salute San Raffaele.
Federico Caligaris-CappioDivision of Molecular Oncology, IRCCS, San Raffaele Scientific Institute; Università Vita-Salute San Raffaele.
Cristina ScielzoDivision of Molecular Oncology, IRCCS, San Raffaele Scientific Institute; scielzo.cristina@hsr.it.
Istituti di Ricovero e Cura a Carattere Scientifico · ITFIRC Institute of Molecular Oncology · ITMolecular Oncology (United States) · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The identification of molecules involved in tumor initiation and progression is fundamental for understanding disease's biology and, as a consequence, for the clinical management of patients. In the present work we will describe an optimized proteomic approach for the identification of molecules involved in the progression of Chronic Lymphocytic Leukemia (CLL). In detail, leukemic cell lysates are resolved by 2-dimensional Electrophoresis (2DE) and visualized as "spots" on the 2DE gels. Comparative analysis of proteomic maps allows the identification of differentially expressed proteins (in terms of abundance and post-translational modifications) that are picked, isolated and identified by Mass Spectrometry (MS). The biological function of the identified candidates can be tested by different assays (i.e. migration, adhesion and F-actin polymerization), that we have optimized for primary leukemic cells.

Indexed as

ActinsAdaptor Proteins, Signal TransducingAmino Acid SequenceBlood ProteinsB-LymphocytesCell MovementCytoskeletonElectrophoresis, Gel, Two-DimensionalHumansLeukemia, Lymphocytic, Chronic, B-CellMolecular Sequence DataPhosphorylationProteomicsSpectrometry, Mass, Matrix-Assisted Laser Desorption-IonizationActinsAdaptor Proteins, Signal TransducingBlood ProteinsHCLS1 protein, human

Identifiers

PMID25350848
PMCPMC4353291
OpenAlexW2051329130

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.