Evidence map›Paper›PMID 25350534›Full record

ArticleJournal of visualized experiments : JoVE2014

Measuring the osmotic water permeability coefficient (Pf) of spherical cells: isolated plant protoplasts as an example.

Arava Shatil-Cohen, Hadas Sibony, Xavier Draye, François Chaumont, Nava Moran, Menachem Moshelion

Open access · bronzeAbstract readVideo-Audio Media
In one paragraph

Article in Journal of visualized experiments : JoVE, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
2.8field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 20 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 3 countries.

Arava Shatil-CohenThe RH Smith Institute of Plant Sciences and Genetics in Agriculture, The Hebrew University of Jerusalem.
Hadas SibonyThe RH Smith Institute of Plant Sciences and Genetics in Agriculture, The Hebrew University of Jerusalem.
Xavier DrayeEarth and Life Institute, Université catholique de Louvain.
François ChaumontInstitut des Sciences de la Vie, Université catholique de Louvain.
Nava MoranThe RH Smith Institute of Plant Sciences and Genetics in Agriculture, The Hebrew University of Jerusalem; nava.moran@mail.huji.ac.il.
Menachem MoshelionThe RH Smith Institute of Plant Sciences and Genetics in Agriculture, The Hebrew University of Jerusalem.
Hebrew University of Jerusalem · ILSmith Institute · GBUCLouvain · BE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Studying AQP regulation mechanisms is crucial for the understanding of water relations at both the cellular and the whole plant levels. Presented here is a simple and very efficient method for the determination of the osmotic water permeability coefficient (P(f)) in plant protoplasts, applicable in principle also to other spherical cells such as frog oocytes. The first step of the assay is the isolation of protoplasts from the plant tissue of interest by enzymatic digestion into a chamber with an appropriate isotonic solution. The second step consists of an osmotic challenge assay: protoplasts immobilized on the bottom of the chamber are submitted to a constant perfusion starting with an isotonic solution and followed by a hypotonic solution. The cell swelling is video recorded. In the third step, the images are processed offline to yield volume changes, and the time course of the volume changes is correlated with the time course of the change in osmolarity of the chamber perfusion medium, using a curve fitting procedure written in Matlab (the 'PfFit'), to yield P(f).

Indexed as

AquaporinsArabidopsisOsmotic PressurePermeabilityPlant ProteinsProtoplastsWaterAquaporinsPlant ProteinsWater

Identifiers

PMID25350534
PMCPMC4841294
OpenAlexW1981298176

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.